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B3EDZ5 (B3EDZ5_CHLL2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine dehydrogenase PIRNR PIRNR000183
EC=1.4.1.1 PIRNR PIRNR000183
Gene names
Ordered Locus Names:Clim_1654
OrganismChlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]
Taxonomic identifier290315 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine + H2O + NAD+ = pyruvate + NH3 + NADH. PIRNR PIRNR000183

Pathway

Amino-acid degradation; L-alanine degradation via dehydrogenase pathway; NH(3) and pyruvate from L-alanine: step 1/1. PIRNR PIRNR000183

Sequence similarities

Belongs to the AlaDH/PNT family. PIRNR PIRNR000183

Ontologies

Keywords
   LigandNAD PIRNR PIRNR000183
   Molecular functionOxidoreductase PIRNR PIRNR000183 EMBL ACD90697.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionalanine dehydrogenase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3EDZ5 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 8FDF6232F02FE040

FASTA36738,954
        10         20         30         40         50         60 
MHIGIPKEIK KMETRVGCTP AGVRYLVNGG HRVVVECGAG EESGFADDKY RRAGAVMVEH 

        70         80         90        100        110        120 
ASDVWQCDMV VKVKEPLEEE YVFFRKGLIL FTYLHLAGNQ ALAEALLASG VTGLAYETVE 

       130        140        150        160        170        180 
DAGRLPLLAP MSEIAGKMSV LMGGCFLAHQ HGGSGVLLGG VPGVLPARVT ILGGGSAGMQ 

       190        200        210        220        230        240 
AARAAAAFGA DVTVLELDHE RMRYLESSLP PQVHTLYSTE QHIDEQLASV DLLIGAVLVP 

       250        260        270        280        290        300 
GAAATRLVTR DMLAAVKKGS VFVDISIDQG GCFETSRATT HDDPVFVENG VIHYCVSNMP 

       310        320        330        340        350        360 
AAYPRTSTEA LSGATLPYIR RIADLGFESA MVMMPGLAGG LNVWNGNITH QVLADSLVME 


FGGNPFL

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References

[1]"Complete sequence of Chlorobium limicola DSM 245."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001097 Genomic DNA. Translation: ACD90697.1.
RefSeqYP_001943676.1. NC_010803.1.

3D structure databases

ProteinModelPortalB3EDZ5.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3EDZ5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6353961.
GenomeReviewsGene locus Clim_1654 in contig CP001097_GR.
KEGGcli:Clim_1654.
PATRIC21375503. VBIChlLim118737_1775.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG289735.
OMAAIGYETV.
ProtClustDBCLSK571319.

Family and domain databases

InterProIPR008141. Ala_DH/Pyr_transHydgase.
IPR007886. AlaDH/PNT_N.
IPR007698. AlaDH/PNT_NAD(H)-bd.
[Graphical view]
KOK00259.
PANTHERPTHR10160:SF3. PTHR10160:SF3. 1 hit.
PfamPF01262. AlaDh_PNT_C. 1 hit.
PF05222. AlaDh_PNT_N. 1 hit.
[Graphical view]
PIRSFPIRSF000183. Alanine_dh. 1 hit.
SMARTSM01002. AlaDh_PNT_C. 1 hit.
SM01003. AlaDh_PNT_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00518. AlaDH. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3EDZ5_CHLL2
AccessionPrimary (citable) accession number: B3EDZ5
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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