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B3ED43 (B3ED43_CHLL2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Nucleotide sugar dehydrogenase EMBL ACD90468.1
EC=1.1.1.22 EMBL ACD90468.1
Gene names
Ordered Locus Names:Clim_1408
OrganismChlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]
Taxonomic identifier290315 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length445 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ACD90468.1
   Molecular functionOxidoreductase EMBL ACD90468.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionNAD binding

Inferred from electronic annotation. Source: InterPro

UDP-glucose 6-dehydrogenase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ACD90468.1
Chain22 – 445424 Potential EMBL ACD90468.1
PRO_5000374818

Sequences

Sequence LengthMass (Da)Tools
B3ED43 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 6CE6DEA9A4B3B3DD

FASTA44549,750
        10         20         30         40         50         60 
MKITIFGSGY VGLVTGACFA EVGNEVLCVD IDQAKIDRLN NGEIPIYEPG LDAIVHENSR 

        70         80         90        100        110        120 
KGRLRFTSNI PEGVEFGLYQ FIAVGTPPDE DGSADLRHVL SVAESIGAHM QDYRIIINKS 

       130        140        150        160        170        180 
TVPVGTADLV REKVLSVLDA RNAGIDFDVV SNPEFLKEGD AVNDFMKPER IVVGVDNPRT 

       190        200        210        220        230        240 
KELLRFLYSP FNRSHERFIA MDVRSAELTK YAANSMLATK ISFMNEIANI AELVGADVEE 

       250        260        270        280        290        300 
VRRGIGSDSR IGFSFIYPGV GYGGSCFPKD VQALERTARK HGYDSRILQA VEAVNHDQKN 

       310        320        330        340        350        360 
SLVRKMKEHF NGDLKGKVIA LWGLAFKPNT DDMREAPSRR VIEELWKEGA LVRVYDPVAM 

       370        380        390        400        410        420 
EEAQRIYGEK EGLHYAESPD EAVSGADALA ILTEWLMFRS PDFDMIKREL KEPVIFDGRN 

       430        440 
IYSPDFMEQF GFTYYSIGRR PRGIS

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References

[1]"Complete sequence of Chlorobium limicola DSM 245."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001097 Genomic DNA. Translation: ACD90468.1.
RefSeqYP_001943447.1. NC_010803.1.

3D structure databases

ProteinModelPortalB3ED43.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3ED43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6356179.
GenomeReviewsGene locus Clim_1408 in contig CP001097_GR.
KEGGcli:Clim_1408.
PATRIC21374933. VBIChlLim118737_1502.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG400967.
OMAICTEWQA.
ProtClustDBCLSK637635.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR021157. Cyt_c1_TM_anchor_C.
IPR016040. NAD(P)-bd_dom.
IPR017476. Nucleotide_sugar_DH.
IPR014027. UDP-Glc/GDP-Man_DH_C.
IPR014026. UDP-Glc/GDP-Man_DH_dimer.
IPR001732. UDP-Glc/GDP-Man_DH_N.
[Graphical view]
Gene3DG3DSA:1.20.5.100. Cyt_c1_TM_anchor_C. 1 hit.
G3DSA:3.40.50.720. NAD(P)-bd. 2 hits.
KOK00012.
PfamPF00984. UDPG_MGDP_dh. 1 hit.
PF03720. UDPG_MGDP_dh_C. 1 hit.
PF03721. UDPG_MGDP_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMARTSM00984. UDPG_MGDP_dh_C. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMsTIGR03026. NDP-sugDHase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3ED43_CHLL2
AccessionPrimary (citable) accession number: B3ED43
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: January 25, 2012
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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