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Protein

Dihydrolipoyl dehydrogenase

Gene

Clim_1379

Organism
Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

Protein N(6)-(dihydrolipoyl)lysine + NAD+ = protein N(6)-(lipoyl)lysine + NADH.UniRule annotation

Cofactori

FADUniRule annotationNote: Binds 1 FAD per subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

FADUniRule annotation, Flavoprotein, NADUniRule annotation

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-1411-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Dihydrolipoyl dehydrogenaseUniRule annotation (EC:1.8.1.4UniRule annotation)
Gene namesi
Ordered Locus Names:Clim_1379Imported
OrganismiChlorobium limicola (strain DSM 245 / NBRC 103803 / 6330)Imported
Taxonomic identifieri290315 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
Proteomesi
  • UP000008841 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi290315.Clim_1379.

Structurei

3D structure databases

ProteinModelPortaliB3ED14.
SMRiB3ED14. Positions 20-496.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 358336FAD/NAD-binding_domInterPro annotationAdd
BLAST
Domaini377 – 486110Pyr_redox_dimInterPro annotationAdd
BLAST

Keywords - Domaini

Redox-active centerUniRule annotation

Phylogenomic databases

eggNOGiENOG4107QN2. Bacteria.
COG1249. LUCA.
HOGENOMiHOG000276708.
KOiK00382.
OMAiVFISIGR.
OrthoDBiEOG6QCD6D.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
3.50.50.60. 2 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR006258. Lipoamide_DH.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR012999. Pyr_OxRdtase_I_AS.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 1 hit.
SSF55424. SSF55424. 1 hit.
TIGRFAMsiTIGR01350. lipoamide_DH. 1 hit.
PROSITEiPS00076. PYRIDINE_REDOX_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3ED14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRWKTLRVSS SIFKRKHIMT RKFDILVIGA GPGGYIAAIR AAQLGFSVAC
60 70 80 90 100
CEFNAYDSPE HEPRLGGTCL NAGCIPLKAL VASSEAYEKT AHSLSSHGIT
110 120 130 140 150
VNGVTIDVAR MQQRKEEIVT RMTGGIQFLF RKNKITLLKG QASFAGKTET
160 170 180 190 200
GFRITIGGND GKEDVVAQKV IIATGSKARH IPNVRVDNVT ICDNEGALKF
210 220 230 240 250
TEAPKKLGVI GAGVIGLELG SVWRRLGAEV TVLEVMPSFL GSADESVSRE
260 270 280 290 300
AAKLFLKQGL RIKLGVRIGQ AKLTEQGISI AFTDDQGAEH LLECDKLIVS
310 320 330 340 350
VGRVPNTDHL NLEAVGLQTD ERGFIPVNDH CATAAPGIFA IGDVVRGPML
360 370 380 390 400
AHKAEDEGVM VAELLAGQKP HIDYNTIPWV IYTTPEIAWV GKTEQQLRSE
410 420 430 440 450
GHDYKTGMFP FAANGRALGL GDVEGFVKML ADGKTDEILG VHIIGANASD
460 470 480 490
LIAEAALAME FRASSEDIAR TCHPHPSLSE AIREAALAID KRALNM
Length:496
Mass (Da):53,326
Last modified:July 22, 2008 - v1
Checksum:i2F5EBF1D30D831FD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD90439.1.

Genome annotation databases

EnsemblBacteriaiACD90439; ACD90439; Clim_1379.
KEGGicli:Clim_1379.
PATRICi21374867. VBIChlLim118737_1470.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD90439.1.

3D structure databases

ProteinModelPortaliB3ED14.
SMRiB3ED14. Positions 20-496.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290315.Clim_1379.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD90439; ACD90439; Clim_1379.
KEGGicli:Clim_1379.
PATRICi21374867. VBIChlLim118737_1470.

Phylogenomic databases

eggNOGiENOG4107QN2. Bacteria.
COG1249. LUCA.
HOGENOMiHOG000276708.
KOiK00382.
OMAiVFISIGR.
OrthoDBiEOG6QCD6D.

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-1411-MONOMER.

Family and domain databases

Gene3Di3.30.390.30. 1 hit.
3.50.50.60. 2 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016156. FAD/NAD-linked_Rdtase_dimer.
IPR006258. Lipoamide_DH.
IPR004099. Pyr_nucl-diS_OxRdtase_dimer.
IPR012999. Pyr_OxRdtase_I_AS.
[Graphical view]
PfamiPF07992. Pyr_redox_2. 1 hit.
PF02852. Pyr_redox_dim. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 1 hit.
SSF55424. SSF55424. 1 hit.
TIGRFAMsiTIGR01350. lipoamide_DH. 1 hit.
PROSITEiPS00076. PYRIDINE_REDOX_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 245 / NBRC 103803Imported.

Entry informationi

Entry nameiB3ED14_CHLL2
AccessioniPrimary (citable) accession number: B3ED14
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: July 6, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Miscellaneous

The active site is a redox-active disulfide bond.UniRule annotation

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.