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B3ECQ4 (B3ECQ4_CHLL2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Dihydroorotase RuleBase RU003441
EC=3.5.2.3 RuleBase RU003441
Gene names
Ordered Locus Names:Clim_1262
OrganismChlorobium limicola (strain DSM 245 / NBRC 103803) [Complete proteome] [HAMAP]
Taxonomic identifier290315 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length440 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

(S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate. RuleBase RU003441 SAAS SAAS002195

Cofactor

Binds 2 zinc ions per subunit By similarity. RuleBase RU003441 SAAS SAAS002195

Pathway

Pyrimidine metabolism; UMP biosynthesis via de novo pathway; (S)-dihydroorotate from bicarbonate: step 3/3. RuleBase RU003441 SAAS SAAS002195

Subunit structure

Homodimer By similarity. SAAS SAAS002195

Sequence similarities

Belongs to the DHOase family. Type 2 subfamily. RuleBase RU003441

Sequences

Sequence LengthMass (Da)Tools
B3ECQ4 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 09953A42511AFC57

FASTA44047,957
        10         20         30         40         50         60 
MSTIFQRAHL LNPAENLDAT GSIRIDGSGF IESVSLGSAD MPHNDDDRVI DLDGKLLVPG 

        70         80         90        100        110        120 
LFDMHCHFRE PGQEYKETLE TGSSAAAAGG YTGVALMPNT RPVIDSPLGV AYIRHHSALL 

       130        140        150        160        170        180 
PVDLEVIGAM TVESRGETLA PFGKFRSYGV TAISDDGTAI QNTQIMRLAF EYASNFDLLI 

       190        200        210        220        230        240 
IQHCEDKTLT KGGVMNESHF STILGLKGIP DVAEAIIVSR DLQLMRYLQQ HKLHDPLNQP 

       250        260        270        280        290        300 
RYHVAHISTG AALDLVRQAK LDGLQVTCEV TPHHFTLSDE DLFLAEAKGN FIMKPPLGSA 

       310        320        330        340        350        360 
ENMQALIDAI ADGTIDAIAT DHAPHAAHEK DCPPDQAAFG ITGLETAVGL TLTELVSKNV 

       370        380        390        400        410        420 
ITMQRAIEML SVNPRKIMNL APVHFRAGEM ANMTIIDPEV EWTVTKDDMK SRSQNTPFIG 

       430        440 
RRLKGRAVGI YHKGALLENR

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References

[1]"Complete sequence of Chlorobium limicola DSM 245."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Zhao F., Li T., Liu Z. expand/collapse author list , Overmann J., Bryant D.A., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 245 / NBRC 103803.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001097 Genomic DNA. Translation: ACD90329.1.
RefSeqYP_001943308.1. NC_010803.1.

3D structure databases

ProteinModelPortalB3ECQ4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3ECQ4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6355363.
GenomeReviewsGene locus Clim_1262 in contig CP001097_GR.
KEGGcli:Clim_1262.
PATRIC21374617. VBIChlLim118737_1346.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG724623.
OMANTPYESM.
ProtClustDBPRK09357.

Family and domain databases

HAMAPMF_00220_B. PyrC_type2_B.
[Tree]
InterProIPR006680. Amidohydro_1.
IPR004722. DHOase.
IPR002195. Dihydroorotase_CS.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
KOK01465.
PfamPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMSSF51338. Metalo_hydrolase. 1 hit.
TIGRFAMsTIGR00857. PyrC_multi. 1 hit.
PROSITEPS00483. DIHYDROOROTASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3ECQ4_CHLL2
AccessionPrimary (citable) accession number: B3ECQ4
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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