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Protein

Superoxide dismutase

Gene

Clim_1098

Organism
Chlorobium limicola (strain DSM 245 / NBRC 103803)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-1128-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Clim_1098Imported
OrganismiChlorobium limicola (strain DSM 245 / NBRC 103803)Imported
Taxonomic identifieri290315 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
ProteomesiUP000008841 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290315.Clim_1098.

Structurei

3D structure databases

ProteinModelPortaliB3EC92.
SMRiB3EC92. Positions 2-198.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013584.
KOiK04564.
OMAiLANWDFV.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3EC92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYQQPALPY AENALEPHIS AKTIGFHYGK HHAAYVNNFN NLVTGTPFDS
60 70 80 90 100
MSIEEVICTT AGDAQKIGVF NNGAQAWNHS FYWNCLSANG GGKPSGELAA
110 120 130 140 150
KIDGDFGSFD KFVEELKAAA ATQFGSGWAW LVLDNGTLKV VKTGNAQTPI
160 170 180 190 200
TSGQTPLLCV DVWEHAYYLD YQNRRPDYVA ATIENLLNWK FAEENYQSAK
Length:200
Mass (Da):21,978
Last modified:July 22, 2008 - v1
Checksum:iD46AAEABA46B3800
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD90167.1.
RefSeqiWP_012466044.1. NC_010803.1.

Genome annotation databases

EnsemblBacteriaiACD90167; ACD90167; Clim_1098.
KEGGicli:Clim_1098.
PATRICi21374257. VBIChlLim118737_1167.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA. Translation: ACD90167.1.
RefSeqiWP_012466044.1. NC_010803.1.

3D structure databases

ProteinModelPortaliB3EC92.
SMRiB3EC92. Positions 2-198.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290315.Clim_1098.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD90167; ACD90167; Clim_1098.
KEGGicli:Clim_1098.
PATRICi21374257. VBIChlLim118737_1167.

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013584.
KOiK04564.
OMAiLANWDFV.
OrthoDBiEOG63NMNT.

Enzyme and pathway databases

BioCyciCLIM290315:GHUH-1128-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 245 / NBRC 103803Imported.

Entry informationi

Entry nameiB3EC92_CHLL2
AccessioniPrimary (citable) accession number: B3EC92
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: July 22, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.