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Protein

Superoxide dismutase

Gene

Clim_1098

Organism
Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi79Divalent metal cationUniRule annotation1
Metal bindingi161Divalent metal cationUniRule annotation1
Metal bindingi165Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciCLIM290315:G1GC7-1117-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Clim_1098Imported
OrganismiChlorobium limicola (strain DSM 245 / NBRC 103803 / 6330)Imported
Taxonomic identifieri290315 [NCBI]
Taxonomic lineageiBacteriaChlorobiChlorobiaChlorobialesChlorobiaceaeChlorobium/Pelodictyon groupChlorobium
Proteomesi
  • UP000008841 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290315.Clim_1098

Structurei

3D structure databases

ProteinModelPortaliB3EC92
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 87Sod_Fe_NInterPro annotationAdd BLAST85
Domaini94 – 194Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiKWGSFDK
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

B3EC92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYQQPALPY AENALEPHIS AKTIGFHYGK HHAAYVNNFN NLVTGTPFDS
60 70 80 90 100
MSIEEVICTT AGDAQKIGVF NNGAQAWNHS FYWNCLSANG GGKPSGELAA
110 120 130 140 150
KIDGDFGSFD KFVEELKAAA ATQFGSGWAW LVLDNGTLKV VKTGNAQTPI
160 170 180 190 200
TSGQTPLLCV DVWEHAYYLD YQNRRPDYVA ATIENLLNWK FAEENYQSAK
Length:200
Mass (Da):21,978
Last modified:July 22, 2008 - v1
Checksum:iD46AAEABA46B3800
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001097 Genomic DNA Translation: ACD90167.1
RefSeqiWP_012466044.1, NC_010803.1

Genome annotation databases

EnsemblBacteriaiACD90167; ACD90167; Clim_1098
KEGGicli:Clim_1098

Similar proteinsi

Entry informationi

Entry nameiB3EC92_CHLL2
AccessioniPrimary (citable) accession number: B3EC92
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: March 28, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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