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B3E7F7 (SELD_GEOLS) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:Glov_2761
OrganismGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) [Complete proteome] [HAMAP]
Taxonomic identifier398767 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length346 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   Coding sequence diversitySelenocysteine
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 346346Selenide, water dikinase HAMAP MF_00625
PRO_1000130520

Regions

Nucleotide binding229 – 2357ATP Potential

Sites

Active site171 Potential
Site201Important for catalytic activity By similarity

Amino acid modifications

Non-standard residue171Selenocysteine HAMAP MF_00625

Sequences

Sequence LengthMass (Da)Tools
B3E7F7 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: E5DBEB2D3643C91C

FASTA34636,061
        10         20         30         40         50         60 
MTNKKIKLTQ TVKAAGUAAK LGPEGLADAL AGLNRPADPR LIVGPETSDD GGVYCLTPEI 

        70         80         90        100        110        120 
ALIESCDVIT PPADAPRAFG RIAAANALSD IYAMGGRPLT AMNLAFFPAC SLQPEVLGEV 

       130        140        150        160        170        180 
LAGGQDALNE AGCCLVGGHT VEDDELKYGL SVTGTVHPEQ VLRNSTARPG DCLLLTKPLG 

       190        200        210        220        230        240 
SGILSTAVKG EMATVEQEAE AVAWMSLLNR AAAELMLRYT PSACTDITGF GLIGHSCEMA 

       250        260        270        280        290        300 
LGSGVTIRLY LDAVPLMQGV TDQVADGMVP AGCYRNRSYY LSRIDAGDCD PERLLPLFDP 

       310        320        330        340 
QTSGGLLIAL QPGAAALFQA EAAENSIFCV LIGDVLPRAE LPVIVV

« Hide

References

[1]"Complete sequence of chromosome of Geobacter lovleyi SZ."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Meincke L., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Sung Y., Fletcher K.E., Ritalahti K.M., Loeffler F.E., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1151 / DSM 17278 / SZ.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001089 Genomic DNA. Translation: ACD96474.1.
RefSeqYP_001952994.1. NC_010814.1.

3D structure databases

ProteinModelPortalB3E7F7.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3E7F7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6367486.
GenomeReviewsGene locus Glov_2761 in contig CP001089_GR.
KEGGglo:Glov_2761.
PATRIC21997197. VBIGeoLov31523_2698.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMAAGXAAKL.
ProtClustDBCLSK827944.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_GEOLS
AccessionPrimary (citable) accession number: B3E7F7
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 22, 2008
Last modified: January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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