B3E5L1 (B3E5L1_GEOLS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal-dependent decarboxylase EMBL ACD94682.1

Gene names

Ordered Locus Names:

Glov_0959 EMBL ACD94682.1

Organism

Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) [Complete proteome] [HAMAP] EMBL ACD94682.1

Taxonomic identifier

398767 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter › Geobacter lovleyi

Protein attributes

Sequence length	538 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3E5L1 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: B51ACF4BF660F4A0	FASTA	538	59,494
	10 20 30 40 50 60 MPTKARANLE TLYRIFTVPE APDSTLGAVD QAITADVAGF LQNHIVAMER PLEEIEASFS 70 80 90 100 110 120 SVTIPEEPTY VSDYTEFVKE NLVAQSVHTA SPGFIGHMTS ALPYFMLPLT RLMTALNQNT 130 140 150 160 170 180 VKVETSKAFT PLERQVLAML HHLIYRCPDE FYPSWIHNSQ AALGAFCSGG TIANTTALWV 190 200 210 220 230 240 ARNRFFAPDG AFRGIAQEGL ARALKHRGVD GIAVLVSERG HYSLGKAADL LGVGRDHLVK 250 260 270 280 290 300 VKTAEDNRID LKALRQECQR LQDQNIRPLA LVGIGGTTET GNIDPLEAMA DLARELDCHF 310 320 330 340 350 360 HVDAAWGGPT LFSDRHRHLL AGIERADSVT IDAHKQLYVP MGAGMVLFRD PTAVSAIEHH 370 380 390 400 410 420 AAYILRHGSK DLGSHTLEGS RPGKALLVHA GLSIMGRKGY ELLIDLGIER ARTFAGMIRQ 430 440 450 460 470 480 HPDFELTSEP ELNILTYRYC PAAIQHLLAT APQAEQARIN GLLDQVCQLL QKHQRESGKT 490 500 510 520 530 FVSRTRLRMS RYGEEITVLR SVLANPLTTD EILTSVLSEQ CEIVRQPEIQ ALLQQVWR

References

[1]

"Complete sequence of chromosome of Geobacter lovleyi SZ." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Meincke L., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Mikhailova N., Sung Y., Fletcher K.E., Ritalahti K.M., Loeffler F.E., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1151 / DSM 17278 / SZ.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001089 Genomic DNA. Translation: ACD94682.1.
RefSeq	YP_001951202.1. NC_010814.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	398767.Glov_0959.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD94682; ACD94682; Glov_0959.
GeneID	6366882.
KEGG	glo:Glov_0959.
PATRIC	21993607. VBIGeoLov31523_0926.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000282553.
KO	K01580.
OMA	CHFHVDA.
ProtClustDB	CLSK874231.
Enzyme and pathway databases
BioCyc	GLOV398767:GH32-968-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3E5L1_GEOLS

Accession

Primary (citable) accession number: B3E5L1

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	May 29, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)