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B3E5L1 (B3E5L1_GEOLS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Glov_0959 EMBL ACD94682.1
OrganismGeobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) [Complete proteome] [HAMAP] EMBL ACD94682.1
Taxonomic identifier398767 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length538 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B3E5L1 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: B51ACF4BF660F4A0

FASTA53859,494
        10         20         30         40         50         60 
MPTKARANLE TLYRIFTVPE APDSTLGAVD QAITADVAGF LQNHIVAMER PLEEIEASFS 

        70         80         90        100        110        120 
SVTIPEEPTY VSDYTEFVKE NLVAQSVHTA SPGFIGHMTS ALPYFMLPLT RLMTALNQNT 

       130        140        150        160        170        180 
VKVETSKAFT PLERQVLAML HHLIYRCPDE FYPSWIHNSQ AALGAFCSGG TIANTTALWV 

       190        200        210        220        230        240 
ARNRFFAPDG AFRGIAQEGL ARALKHRGVD GIAVLVSERG HYSLGKAADL LGVGRDHLVK 

       250        260        270        280        290        300 
VKTAEDNRID LKALRQECQR LQDQNIRPLA LVGIGGTTET GNIDPLEAMA DLARELDCHF 

       310        320        330        340        350        360 
HVDAAWGGPT LFSDRHRHLL AGIERADSVT IDAHKQLYVP MGAGMVLFRD PTAVSAIEHH 

       370        380        390        400        410        420 
AAYILRHGSK DLGSHTLEGS RPGKALLVHA GLSIMGRKGY ELLIDLGIER ARTFAGMIRQ 

       430        440        450        460        470        480 
HPDFELTSEP ELNILTYRYC PAAIQHLLAT APQAEQARIN GLLDQVCQLL QKHQRESGKT 

       490        500        510        520        530 
FVSRTRLRMS RYGEEITVLR SVLANPLTTD EILTSVLSEQ CEIVRQPEIQ ALLQQVWR 

« Hide

References

[1]"Complete sequence of chromosome of Geobacter lovleyi SZ."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Meincke L., Brettin T., Detter J.C., Han C., Tapia R., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Sung Y., Fletcher K.E., Ritalahti K.M., Loeffler F.E., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1151 / DSM 17278 / SZ.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001089 Genomic DNA. Translation: ACD94682.1.
RefSeqYP_001951202.1. NC_010814.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING398767.Glov_0959.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD94682; ACD94682; Glov_0959.
GeneID6366882.
KEGGglo:Glov_0959.
PATRIC21993607. VBIGeoLov31523_0926.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAGMMHNLV.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycGLOV398767:GH32-968-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3E5L1_GEOLS
AccessionPrimary (citable) accession number: B3E5L1
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: May 14, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)