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B3E0X2

- B3E0X2_METI4

UniProt

B3E0X2 - B3E0X2_METI4

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Protein
Submitted name: dTDP-D-glucose 4,6-dehydratase
Gene
rfbB, Minf_2395
Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. coenzyme binding Source: InterPro
  2. dTDP-glucose 4,6-dehydratase activity Source: InterPro

GO - Biological processi

  1. nucleotide-sugar metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciMINF481448:GJEI-2440-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
dTDP-D-glucose 4,6-dehydrataseImported
Gene namesi
Name:rfbBImported
Ordered Locus Names:Minf_2395Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
ProteomesiUP000009149: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi481448.Minf_2395.

Structurei

3D structure databases

ProteinModelPortaliB3E0X2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1088.
HOGENOMiHOG000168006.
KOiK01710.
OMAiCLERHNI.
OrthoDBiEOG6PZXCX.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR005888. dTDP_Gluc_deHydtase.
IPR001509. Epimerase_deHydtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR10366:SF41. PTHR10366:SF41. 1 hit.
PfamiPF01370. Epimerase. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01181. dTDP_gluc_dehyt. 1 hit.

Sequencei

Sequence statusi: Complete.

B3E0X2-1 [UniParc]FASTAAdd to Basket

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MAGLMGKKNF EFIQADISDQ KRMEQILFEE KIEAIVHFAA ESHVDRSIDD    50
PGLFVQSNVV GTYKLLESAF VYFSSLSPEK KERFRFIHIS TDEVYGSIPM 100
DGAPTKEGGL YAPSSPYSAS KAASDHFVAA YYKTYGLPAL ITHSSNNYGP 150
RQHPEKMIPH MICNALEEKQ LPVYGQGLNV RDWIYVEDHC EGVWKLLLKG 200
RPGEVYHIGK GGGISNIELV KKICALLDSF FPRSSGKSYA ELIRFVADRP 250
GHDLRYALDV SKMKREIGWQ AQVDLDRGLE KTLFWYVENR DWVQSVMNKG 300
YTLKRQGLGR TRSI 314
Length:314
Mass (Da):35,626
Last modified:July 22, 2008 - v1
Checksum:i4621A3C39DC23C0E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000975 Genomic DNA. Translation: ACD84449.1.
RefSeqiYP_001941046.1. NC_010794.1.

Genome annotation databases

EnsemblBacteriaiACD84449; ACD84449; Minf_2395.
GeneIDi6353349.
KEGGimin:Minf_2395.
PATRICi22494053. VBIMetInf111569_2494.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000975 Genomic DNA. Translation: ACD84449.1 .
RefSeqi YP_001941046.1. NC_010794.1.

3D structure databases

ProteinModelPortali B3E0X2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 481448.Minf_2395.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD84449 ; ACD84449 ; Minf_2395 .
GeneIDi 6353349.
KEGGi min:Minf_2395.
PATRICi 22494053. VBIMetInf111569_2494.

Phylogenomic databases

eggNOGi COG1088.
HOGENOMi HOG000168006.
KOi K01710.
OMAi CLERHNI.
OrthoDBi EOG6PZXCX.

Enzyme and pathway databases

BioCyci MINF481448:GJEI-2440-MONOMER.

Family and domain databases

Gene3Di 3.40.50.720. 1 hit.
InterProi IPR005888. dTDP_Gluc_deHydtase.
IPR001509. Epimerase_deHydtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
PANTHERi PTHR10366:SF41. PTHR10366:SF41. 1 hit.
Pfami PF01370. Epimerase. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01181. dTDP_gluc_dehyt. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
    Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F.
    , Feng L., Wang L., Alam M.
    Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate V4.

Entry informationi

Entry nameiB3E0X2_METI4
AccessioniPrimary (citable) accession number: B3E0X2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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