B3E0X2 (B3E0X2_METI4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
dTDP-D-glucose 4,6-dehydratase EMBL ACD84449.1

Gene names

Name:	rfbB EMBL ACD84449.1
Ordered Locus Names:	Minf_2395

Organism

Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4)) [Complete proteome] [HAMAP]

Taxonomic identifier

481448 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chlamydiae/Verrucomicrobia group › Verrucomicrobia › unclassified Verrucomicrobia › Methylacidiphilales › Methylacidiphilaceae › Methylacidiphilum › Methylacidiphilum infernorum

Protein attributes

Sequence length	314 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nucleotide-sugar metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	coenzyme binding Inferred from electronic annotation. Source: InterPro dTDP-glucose 4,6-dehydratase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3E0X2 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 4621A3C39DC23C0E	FASTA	314	35,626
	10 20 30 40 50 60 MAGLMGKKNF EFIQADISDQ KRMEQILFEE KIEAIVHFAA ESHVDRSIDD PGLFVQSNVV 70 80 90 100 110 120 GTYKLLESAF VYFSSLSPEK KERFRFIHIS TDEVYGSIPM DGAPTKEGGL YAPSSPYSAS 130 140 150 160 170 180 KAASDHFVAA YYKTYGLPAL ITHSSNNYGP RQHPEKMIPH MICNALEEKQ LPVYGQGLNV 190 200 210 220 230 240 RDWIYVEDHC EGVWKLLLKG RPGEVYHIGK GGGISNIELV KKICALLDSF FPRSSGKSYA 250 260 270 280 290 300 ELIRFVADRP GHDLRYALDV SKMKREIGWQ AQVDLDRGLE KTLFWYVENR DWVQSVMNKG 310 YTLKRQGLGR TRSI

References

[1]

"Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia." Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F. , Feng L., Wang L., Alam M. Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Isolate V4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000975 Genomic DNA. Translation: ACD84449.1.
RefSeq	YP_001941046.1. NC_010794.1.
3D structure databases
ProteinModelPortal	B3E0X2.
ModBase	Search...
Protein-protein interaction databases
STRING	481448.Minf_2395.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD84449; ACD84449; Minf_2395.
GeneID	6353349.
KEGG	min:Minf_2395.
PATRIC	22494053. VBIMetInf111569_2494.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1088.
HOGENOM	HOG000168006.
KO	K01710.
OMA	RENENWW.
Enzyme and pathway databases
BioCyc	MINF481448:GJEI-2440-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR005888. dTDP_Gluc_deHydtase. IPR001509. Epimerase_deHydtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
PANTHER	PTHR10366:SF41. PTHR10366:SF41. 1 hit.
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
TIGRFAMs	TIGR01181. dTDP_gluc_dehyt. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3E0X2_METI4

Accession

Primary (citable) accession number: B3E0X2

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)