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B3E0X2

- B3E0X2_METI4

UniProt

B3E0X2 - B3E0X2_METI4

Protein
Submitted name:

dTDP-D-glucose 4,6-dehydratase

Gene

rfbB

Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (22 Jul 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. coenzyme binding Source: InterPro
    2. dTDP-glucose 4,6-dehydratase activity Source: InterPro

    GO - Biological processi

    1. nucleotide-sugar metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciMINF481448:GJEI-2440-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    dTDP-D-glucose 4,6-dehydrataseImported
    Gene namesi
    Name:rfbBImported
    Ordered Locus Names:Minf_2395Imported
    OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
    Taxonomic identifieri481448 [NCBI]
    Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
    ProteomesiUP000009149: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi481448.Minf_2395.

    Structurei

    3D structure databases

    ProteinModelPortaliB3E0X2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1088.
    HOGENOMiHOG000168006.
    KOiK01710.
    OMAiCLERHNI.
    OrthoDBiEOG6PZXCX.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR005888. dTDP_Gluc_deHydtase.
    IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PANTHERiPTHR10366:SF41. PTHR10366:SF41. 1 hit.
    PfamiPF01370. Epimerase. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01181. dTDP_gluc_dehyt. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    B3E0X2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAGLMGKKNF EFIQADISDQ KRMEQILFEE KIEAIVHFAA ESHVDRSIDD    50
    PGLFVQSNVV GTYKLLESAF VYFSSLSPEK KERFRFIHIS TDEVYGSIPM 100
    DGAPTKEGGL YAPSSPYSAS KAASDHFVAA YYKTYGLPAL ITHSSNNYGP 150
    RQHPEKMIPH MICNALEEKQ LPVYGQGLNV RDWIYVEDHC EGVWKLLLKG 200
    RPGEVYHIGK GGGISNIELV KKICALLDSF FPRSSGKSYA ELIRFVADRP 250
    GHDLRYALDV SKMKREIGWQ AQVDLDRGLE KTLFWYVENR DWVQSVMNKG 300
    YTLKRQGLGR TRSI 314
    Length:314
    Mass (Da):35,626
    Last modified:July 22, 2008 - v1
    Checksum:i4621A3C39DC23C0E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000975 Genomic DNA. Translation: ACD84449.1.
    RefSeqiYP_001941046.1. NC_010794.1.

    Genome annotation databases

    EnsemblBacteriaiACD84449; ACD84449; Minf_2395.
    GeneIDi6353349.
    KEGGimin:Minf_2395.
    PATRICi22494053. VBIMetInf111569_2494.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000975 Genomic DNA. Translation: ACD84449.1 .
    RefSeqi YP_001941046.1. NC_010794.1.

    3D structure databases

    ProteinModelPortali B3E0X2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 481448.Minf_2395.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACD84449 ; ACD84449 ; Minf_2395 .
    GeneIDi 6353349.
    KEGGi min:Minf_2395.
    PATRICi 22494053. VBIMetInf111569_2494.

    Phylogenomic databases

    eggNOGi COG1088.
    HOGENOMi HOG000168006.
    KOi K01710.
    OMAi CLERHNI.
    OrthoDBi EOG6PZXCX.

    Enzyme and pathway databases

    BioCyci MINF481448:GJEI-2440-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR005888. dTDP_Gluc_deHydtase.
    IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    PANTHERi PTHR10366:SF41. PTHR10366:SF41. 1 hit.
    Pfami PF01370. Epimerase. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01181. dTDP_gluc_dehyt. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
      Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F.
      , Feng L., Wang L., Alam M.
      Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Isolate V4Imported.

    Entry informationi

    Entry nameiB3E0X2_METI4
    AccessioniPrimary (citable) accession number: B3E0X2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 22, 2008
    Last sequence update: July 22, 2008
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3