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B3E0H2 (B3E0H2_METI4) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length133 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACD84401.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3E0H2 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 5C63D3325FB74D36

FASTA13315,609
        10         20         30         40         50         60 
MSDHIAWKGL NRMPQFVIQE HWARTHHFDL RLEKEGVLKS WALPKGMPVD DEKRLAIQVE 

        70         80         90        100        110        120 
DHDLDYGQFE GEIPPGEYGA GKVAIWDKGR YDPVEWTGDK ILFVLHGERL KGRYVLIRLK 

       130 
RSAPDHWLIR KID 

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References

[1]"Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F. expand/collapse author list , Feng L., Wang L., Alam M.
Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Isolate V4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000975 Genomic DNA. Translation: ACD84401.1.
RefSeqYP_001940998.1. NC_010794.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING481448.Minf_2347.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD84401; ACD84401; Minf_2347.
GeneID6353301.
KEGGmin:Minf_2347.
PATRIC22493961. VBIMetInf111569_2448.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000046158.
KOK01971.
OMAPAFVLHE.
OrthoDBEOG661H49.
ProtClustDBCLSK2328066.

Enzyme and pathway databases

BioCycMINF481448:GJEI-2392-MONOMER.

Family and domain databases

InterProIPR014144. LigD_PE_domain.
[Graphical view]
PfamPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3E0H2_METI4
AccessionPrimary (citable) accession number: B3E0H2
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: April 16, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)