B3DYB7 (B3DYB7_METI4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase family protein EMBL ACD82394.1

Gene names

Name:	cda1 EMBL ACD82394.1
Ordered Locus Names:	Minf_0336

Organism

Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4)) [Complete proteome] [HAMAP]

Taxonomic identifier

481448 [NCBI]

Taxonomic lineage

Bacteria › Verrucomicrobia › unclassified Verrucomicrobia › Methylacidiphilales › Methylacidiphilaceae › Methylacidiphilum

Protein attributes

Sequence length	261 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DYB7 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 3B2CBDAD19FE751C	FASTA	261	29,465
	10 20 30 40 50 60 MLMKRRDFFK KVALSIPGFA MGMSLKNVFA QSTQPVKNQA VSPSLNTTKN PLDIEVPFVH 70 80 90 100 110 120 NGPGFGRRIA VTFDDGPAPI CTEMVLKALE SRKIPATFFM LGEHVKTYPS LVREVHAAGH 130 140 150 160 170 180 EIGNHTFNHP QLSKLPDAQV EQQIRVTQDL IVDAIGNRPV WLRPPYGSFR RSQAHIAYKF 190 200 210 220 230 240 KLGIALWNVD TRDWTKPGIQ KILEIIEKET RPGSIILMHD IHRETAQNVG RILDFLLEKE 250 260 YEFSTLTGFI GEPYTHQAVP S

References

[1]

"Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia." Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F. , Feng L., Wang L., Alam M. Biol. Direct 3:26-26(2008) [PubMed: 18593465] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Isolate V4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000975 Genomic DNA. Translation: ACD82394.1.
RefSeq	YP_001938993.1. NC_010794.1.
3D structure databases
ProteinModelPortal	B3DYB7.
ModBase	Search...
Protein-protein interaction databases
STRING	B3DYB7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6351252.
GenomeReviews	Gene locus Minf_0336 in contig CP000975_GR.
KEGG	min:Minf_0336.
PATRIC	22489687. VBIMetInf111569_0351.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG751163.
OMA	SEYIENT.
Family and domain databases
InterPro	IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit.
Pfam	PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3DYB7_METI4

Accession

Primary (citable) accession number: B3DYB7

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)