B3DXA1 (B3DXA1_METI4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase 1 HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase 1 HAMAP MF_00484

Gene names

Name:	glgA EMBL ACD83810.1
Synonyms:	glgA1 HAMAP MF_00484
Ordered Locus Names:	Minf_1756

Organism

Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4)) [Complete proteome] [HAMAP]

Taxonomic identifier

481448 [NCBI]

Taxonomic lineage

Bacteria › Verrucomicrobia › unclassified Verrucomicrobia › Methylacidiphilales › Methylacidiphilaceae › Methylacidiphilum

Protein attributes

Sequence length	483 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	15	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	B3DXA1 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: D5FD6C6609847C35	FASTA	483	54,457
	10 20 30 40 50 60 MNILFISTEL SPYAKTGGLG DAVASLLKAL QAKGYSVGCV LPLYRSLMDR FKAMKKNGLL 70 80 90 100 110 120 LKIHFGGKIV PVQVIQTQTD TGFPLFLLRS DAFFNRDFIY GPPGKEYADN FQRFVFFSKA 130 140 150 160 170 180 ALELAQWIKP LPKILHVHDW PTALVPLFVR HLGLPFHTVL TIHNLSYQGI FESHLFGLTG 190 200 210 220 230 240 LPSIYFSLHG LEFFGKINLL KGGIIFSDWL TTVSPSYALE IQNPGYGCGL EGVIKQRAYK 250 260 270 280 290 300 LTGILNGVDY SLWNPKTDPY IVQNYSLFNL KGKETCKESL LKTFFLSFDD KPLFCTLSRF 310 320 330 340 350 360 IEQKGFELII PLIRELVFNG CRFIFFGEGS SRIEKLLLEA SSNYPTHVAT KIGFDEILAH 370 380 390 400 410 420 QIVAGADFLL MPSLFEPCGL SHLYGMKYAT LPIARKTGGL ADTIDGWDEQ KHRGTGILFD 430 440 450 460 470 480 DPTPAALLKA IKKALHIFQN KSLLSSMRKE AMKKDFSWQK CLSSYEKIYR RFDVSHSLPL YSH

References

[1]

"Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia." Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F. , Feng L., Wang L., Alam M. Biol. Direct 3:26-26(2008) [PubMed: 18593465] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Isolate V4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000975 Genomic DNA. Translation: ACD83810.1.
RefSeq	YP_001940408.1. NC_010794.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3DXA1.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6352702.
GenomeReviews	Gene locus Minf_1756 in contig CP000975_GR.
KEGG	min:Minf_1756.
PATRIC	22492687. VBIMetInf111569_1819.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG596384.
OMA	VIHNLAH.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3DXA1_METI4

Accession

Primary (citable) accession number: B3DXA1

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)