SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

B3DX22

- B3DX22_METI4

UniProt

B3DX22 - B3DX22_METI4

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Glutamate decarboxylase
Gene
gadB, Minf_0102
Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMINF481448:GJEI-107-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported
Gene namesi
Name:gadBImported
Ordered Locus Names:Minf_0102Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
ProteomesiUP000009149: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi481448.Minf_0102.

Structurei

3D structure databases

ProteinModelPortaliB3DX22.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiERQTGID.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

B3DX22-1 [UniParc]FASTAAdd to Basket

« Hide

MVEAVPKYRL PQKGMPPEVA AQLIRDELML EGNPRLNLAT FVTTWMEKEA    50
RELIAETYDK NLIDKDEYPK TAEIEKRCVR MIARLFHGSD NEKPVGTSTV 100
GSSEAIMLAG LAMKWNWKKR QKNSGRSFDK PNLVMGTNVQ VVWEKFCRYF 150
EVEPRFIPVV AGSYVTNPEK VASYLDDNTI GVVAILGTTY SGEFEPIEQI 200
HEAIKDFCLT RGMKIPLHID AASGGFVAPF IHPELKWDFQ LPLVESINVS 250
GHKYGLVYPG VGWAIWRTES SLPEELIFKV NYLGGELPTF SLNFSRPGSQ 300
VIAQYYNFLR LGEEGYIQIL KSMQSISLHL AEKIESLRIF EMISRGKDIP 350
VICFELKAEE PFSVFDLSHR LREKGWQVPA YFMPPEAQNT AVMRIVIREG 400
FSRDMADVLF HDIKTAVEEL RTHTLSRQPR KSLRFIH 437
Length:437
Mass (Da):49,940
Last modified:July 22, 2008 - v1
Checksum:i78994EDDE719411A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000975 Genomic DNA. Translation: ACD82162.1.
RefSeqiYP_001938761.1. NC_010794.1.

Genome annotation databases

EnsemblBacteriaiACD82162; ACD82162; Minf_0102.
GeneIDi6351017.
KEGGimin:Minf_0102.
PATRICi22489187. VBIMetInf111569_0104.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000975 Genomic DNA. Translation: ACD82162.1 .
RefSeqi YP_001938761.1. NC_010794.1.

3D structure databases

ProteinModelPortali B3DX22.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 481448.Minf_0102.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD82162 ; ACD82162 ; Minf_0102 .
GeneIDi 6351017.
KEGGi min:Minf_0102.
PATRICi 22489187. VBIMetInf111569_0104.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000070228.
KOi K01580.
OMAi ERQTGID.
OrthoDBi EOG6TFCPW.

Enzyme and pathway databases

BioCyci MINF481448:GJEI-107-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
    Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F.
    , Feng L., Wang L., Alam M.
    Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate V4.

Entry informationi

Entry nameiB3DX22_METI4
AccessioniPrimary (citable) accession number: B3DX22
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: November 13, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi