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Protein

Superoxide dismutase

Gene

sodA

Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:Minf_0048Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
Proteomesi
  • UP000009149 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi481448.Minf_0048.

Structurei

3D structure databases

ProteinModelPortaliB3DWW8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini107 – 205Sod_Fe_CInterPro annotationAdd BLAST99

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili33 – 60Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4107ZQR. Bacteria.
COG0605. LUCA.
KOiK04564.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
SUPFAMiSSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

B3DWW8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADLFSLKIL PDKSELFLKK FENGIGKISS KSLANHVNLY KNLLEEANNL
60 70 80 90 100
AKECNEYVGR WLSSQPLEES PKNELAFSGI GQWYSLYGRI KSHELYFSGL
110 120 130 140 150
NKNGSCEGKI KDLLESNFKS IENFKLDLKL KALHTSGWVW TVLDHSTGEL
160 170 180 190 200
FNIPSNREDA FPFAGMNALI ALDLAEHAYE PDFNQDKEGY IEEFLNALDW
210
QEIEKNLPLM
Length:210
Mass (Da):23,970
Last modified:July 22, 2008 - v1
Checksum:i6ED242FE54E90236
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000975 Genomic DNA. Translation: ACD82108.1.
RefSeqiWP_012462390.1. NC_010794.1.

Genome annotation databases

EnsemblBacteriaiACD82108; ACD82108; Minf_0048.
KEGGimin:Minf_0048.
PATRICi22489071. VBIMetInf111569_0049.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000975 Genomic DNA. Translation: ACD82108.1.
RefSeqiWP_012462390.1. NC_010794.1.

3D structure databases

ProteinModelPortaliB3DWW8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi481448.Minf_0048.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD82108; ACD82108; Minf_0048.
KEGGimin:Minf_0048.
PATRICi22489071. VBIMetInf111569_0049.

Phylogenomic databases

eggNOGiENOG4107ZQR. Bacteria.
COG0605. LUCA.
KOiK04564.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
SUPFAMiSSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiB3DWW8_METI4
AccessioniPrimary (citable) accession number: B3DWW8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: November 2, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.