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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Minf_0008

Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMINF481448:G1GBH-7-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Minf_0008Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaMethylacidiphilaeMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
Proteomesi

Interactioni

Protein-protein interaction databases

STRINGi481448.Minf_0008

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini70 – 224RNA_ligaseInterPro annotationAdd BLAST155

Phylogenomic databases

eggNOGiENOG4105S3H Bacteria
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG091H2928

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

B3DWH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYEQLIEEIL QSKKGQLGRF WEYSYVRLTH AYKGWPEGTV FLKDLAIAGF
60 70 80 90 100
PKIGRINSLE PGLREQFPSS FWMEEKVDGY NVRIFQYKGK ILCATRGGFL
110 120 130 140 150
CPFSTDRIGE LMPLGIFNDH PSLVLCGEIA GPDNPYIEGP SPLVQEDIKL
160 170 180 190 200
FIFDIAQLPT LEFLPQRQKQ ELICRYGLPS VKNFGLFKNN GNDLVEIKKI
210 220 230 240 250
LLCLHNEYRE GAVFKEEPFG RYAKYVTAHS DLNDIAVLSH KIMDISPNYF
260 270 280 290 300
IDRILRYVLF LIDMGIIEEN GWDEKLGKAF ISSIKEVLKR VKEGGKSSRL
310 320 330 340 350
FRCRFRNPQN AQYLIDHLKH IPGHQEHVIV KKFYKDKDYW YLEFEKIFPA
360
TGDSLRNWLS GALRFD
Length:366
Mass (Da):42,508
Last modified:July 22, 2008 - v1
Checksum:i0AA4C48C7B367330
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000975 Genomic DNA Translation: ACD82068.1
RefSeqiWP_012462350.1, NC_010794.1

Genome annotation databases

EnsemblBacteriaiACD82068; ACD82068; Minf_0008
KEGGimin:Minf_0008

Similar proteinsi

Entry informationi

Entry nameiB3DWH3_METI4
AccessioniPrimary (citable) accession number: B3DWH3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: March 28, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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