B3DU97 (B3DU97_BIFLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Formyltetrahydrofolate synthetase EMBL ACD98716.1

Gene names

Name:	thfS2 EMBL ACD98716.1
Ordered Locus Names:	BLD_1271

Organism

Bifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]

Taxonomic identifier

205913 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	505 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	folic acid-containing compound biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro formate-tetrahydrofolate ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DU97 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: B5643626B99C1A8D	FASTA	505	54,058
	10 20 30 40 50 60 MTTIEDFTSQ YGLVQKIDAF GYMKYLAENP DAPRKHGKVV LVTADTPLKA SRGEGKTTTT 70 80 90 100 110 120 IALIDALNKR GIDATAVLRQ PSMGITAAGS KGGASGGGKA SLTHPELIDW GLCGEMGAIE 130 140 150 160 170 180 AAQNLLVSFA EKAIDDGKLD TILVPRVSEV PSRSLRSTAV DYGKGNVPEK VVLTPTCELM 190 200 210 220 230 240 QIVVLSRSMD EISERVSKMI AGTKDGKAVT FGEFVDLWRI TGILADAVKP AKTETVNGSP 250 260 270 280 290 300 VYVHGGPFAN VSIGIPTLVS VEMACALHDV VIVEAGYGTD AGAQKWLDIA CREYGAQWPS 310 320 330 340 350 360 AAIVVTRAST WRDDPELAWR YPFHVQRLEN LDIPTFPLIN LWEGEDDQVP SLKATADELG 370 380 390 400 410 420 FRTPIIGNLF RDGGEALAPQ LDGFVDALQN GSMPAEPHSH KGMALTENAK WVAENAYGVP 430 440 450 460 470 480 AERVIYKPGF TESVSEAMEL CQSAGISLDD LAFVAVKSPA TMTDNDRAPE EERTVTLKKV 490 500 EVHAGAGLVH VNLTTSLTTP MPKIV

References

[1]

"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth." Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J. BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000605 Genomic DNA. Translation: ACD98716.1.
RefSeq	YP_001955214.1. NC_010816.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3DU97.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6363897.
GenomeReviews	Gene locus BLD_1271 in contig CP000605_GR.
KEGG	blj:BLD_1271.
PATRIC	21115530. VBIBifLon134794_1288.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG350901.
OMA	MALTENA.
ProtClustDB	CLSK572650.
Family and domain databases
InterPro	IPR000559. Formate_THF_ligase. IPR020628. Formate_THF_ligase_CS. [Graphical view]
KO	K01938.
Pfam	PF01268. FTHFS. 1 hit. [Graphical view]
PROSITE	PS00721. FTHFS_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3DU97_BIFLD

Accession

Primary (citable) accession number: B3DU97

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)