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B3DTF7 (B3DTF7_BIFLD) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:lplA EMBL ACD98426.1
Ordered Locus Names:BLD_0980 EMBL ACD98426.1
OrganismBifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP] EMBL ACD98426.1
Taxonomic identifier205913 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length253 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACD98426.1
Transferase SAAS SAAS004143
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcellular protein modification process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3DTF7 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 835285CABF25F201

FASTA25328,249
        10         20         30         40         50         60 
MVSPDAPNTP ASINTQTKQP DKSSEYRERW NALRPQLTVI HDHPRTSDEQ MAIDETWARE 

        70         80         90        100        110        120 
VAAGTRQPTI RFWEWAGPAV VIGRFQSAQD EVNLDIAEQL GFDVVRRCTG GGAMFIEPGN 

       130        140        150        160        170        180 
TITYSLYAPL DFVQGVSIEE SYRLCDWWLV EALRELGLDV RFAGLNDIAS QYGKIGGAAQ 

       190        200        210        220        230        240 
RRFPVGSGGA VLHHVTMAYD IDAAKMSRVL NTSREKMSDK AVKSAVKRVD PMKSQTGLSR 

       250 
EHIVEHLIDW FTA 

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References

[1]"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
BMC Genomics 9:247-247(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DJO10A EMBL ACD98426.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000605 Genomic DNA. Translation: ACD98426.1.
RefSeqYP_001954924.1. NC_010816.1.

3D structure databases

ProteinModelPortalB3DTF7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING205913.BLD_0980.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD98426; ACD98426; BLD_0980.
GeneID6362648.
KEGGblj:BLD_0980.
PATRIC21114912. VBIBifLon134794_0994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0095.
HOGENOMHOG000245033.
KOK03800.
OMAASQYGKI.
OrthoDBEOG6038ZS.
ProtClustDBCLSK572966.

Enzyme and pathway databases

BioCycBLON205913:GJB4-1010-MONOMER.

Family and domain databases

InterProIPR004143. BPL_LipA_LipB.
[Graphical view]
PfamPF03099. BPL_LplA_LipB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3DTF7_BIFLD
AccessionPrimary (citable) accession number: B3DTF7
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: December 11, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)