B3DTF4 (B3DTF4_BIFLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NADH/flavin oxidoreductase EMBL ACD98423.1

Gene names

Name:	nemA EMBL ACD98423.1
Ordered Locus Names:	BLD_0977

Organism

Bifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]

Taxonomic identifier

205913 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	FMN binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DTF4 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: B67549479C50FB6E	FASTA	457	49,277
	10 20 30 40 50 60 MSNDDLTHEN FDFRGFDVPD LKAVTLASSS DGDQSKQPKT KHEDASKNRK HGKKKSKSDA 70 80 90 100 110 120 RSKKRAGAGK TSESFDDYED YEEREAVSKA DKKVSKDRPG LFAPMTLREV TVRNRIWLPP 130 140 150 160 170 180 MCTYSSFARD GRPTPFHYQH YVSRAFGGFG MVIVESTAVA PEGRITPCDL GLWEDGQIDA 190 200 210 220 230 240 WRWIVDGIRE AGAVPAIQLN HAGRKASTGC FAVGYDGQSV PEEAGGWPTM APSEIAFGGL 250 260 270 280 290 300 RTPRALSVDE IHGLVGAFAA AAGRAVAAGF QAIQIHAAHG YLISQFLDPL SNERDDEYGG 310 320 330 340 350 360 DLTGRSRFLV EVVDAVRGAV PEGVPVLVRI SATDWAAGGW DLDQTIALSK VLKEHGVDVM 370 380 390 400 410 420 DVSTGGIMSG VSIPVKPNYQ VPFSEQVKAK ADIPVTAVGL ITKPKQAAKI LAHGEADAVE 430 440 450 IGRAALRDPY WPLRAANKLG IPSTEIPYAP QYVAGAY

References

[1]

"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth." Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J. BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000605 Genomic DNA. Translation: ACD98423.1.
RefSeq	YP_001954921.1. NC_010816.1.
3D structure databases
ProteinModelPortal	B3DTF4.
ModBase	Search...
Protein-protein interaction databases
STRING	B3DTF4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6362645.
GenomeReviews	Gene locus BLD_0977 in contig CP000605_GR.
KEGG	blj:BLD_0977.
PATRIC	21114904. VBIBifLon134794_0990.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG583461.
OMA	WVEDGWN.
ProtClustDB	CLSK572964.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR001155. OxRdtase_FMN_N. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
Pfam	PF00724. Oxidored_FMN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3DTF4_BIFLD

Accession

Primary (citable) accession number: B3DTF4

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)