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Reviewed, UniProtKB/Swiss-Prot B3DSQ0 (AROA_BIFLD)

Last modified November 3, 2009. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    3-phosphoshikimate 1-carboxyvinyltransferase
    EC=2.5.1.19
Alternative name(s):
    5-enolpyruvylshikimate-3-phosphate synthase
      Short name=EPSP synthase
      Short name=EPSPS
Gene names
Name: aroA
Ordered Locus Names: BLD_0723
OrganismBifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]
Taxonomic identifier205913 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length445 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + 3-phosphoshikimate = phosphate + 5-O-(1-carboxyvinyl)-3-phosphoshikimate. HAMAP MF_00210

Pathway

Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 6/7. HAMAP MF_00210

Subunit structure

Monomer By similarity.

Subcellular location

Cytoplasm Probable.

Sequence similarities

Belongs to the EPSP synthase family.

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Aromatic amino acid biosynthesis
   Cellular componentCytoplasm
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processaromatic amino acid family biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular function3-phosphoshikimate 1-carboxyvinyltransferase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 4454453-phosphoshikimate 1-carboxyvinyltransferase HAMAP MF_00210
PRO_1000118779

Sequences

Sequence LengthMass (Da)Tools
B3DSQ0-1 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 73021F77B9FA3291

FASTA44546,741
        10         20         30         40         50         60 
MTERLTNLWP APLAAQPLNA TVTVPGSKSL SNRYLILAAL GSKPVTLIGL LRSRDTDLMM 

        70         80         90        100        110        120 
GALEALGVRC DVDSATDTTV TVTPPVSGRF HGNVNVFCGL AGTVMRFVPG LALFADGPVN 

       130        140        150        160        170        180 
FDGDEQAYAR PMKPVLDGLE QLGATVDYHG EVGRLPFTIT PPATLPAAQA QVSIDSSGSS 

       190        200        210        220        230        240 
QFISGLLLIS SKLPGGLHLA HTGEKTPSLP HIRMTVADVT GAGGAVEADE SARTWTVEPR 

       250        260        270        280        290        300 
AMQLSSKVTV EPDLSNAAPF LGAALIAGGT VRVPHWPETT TQPGGLLPGY LEQMGAEVSF 

       310        320        330        340        350        360 
PTIGGVRYCE VTGDGTVRGL GTFDLTAAGE IAPSLAAILV FADKSTDMVG IGHLRGHETN 

       370        380        390        400        410        420 
RLEALVNEIR RVGGAAEELP DGLRIEPVPA ETLHGAVMET YADHRMATFA AMLGLRIPDI 

       430        440 
EVINVATTRK TLPDFVGMWS GMLRQ 

« Hide

References

[1]"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP000605 Genomic DNA. Translation: ACD98169.1.
RefSeqYP_001954667.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID6363214.
GenomeReviewsGene locus BLD_0723 in contig CP000605_GR.
KEGGblj:BLD_0723.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAHRMATAG.

Family and domain databases

HAMAPMF_00210.
[Tree]
InterProIPR016228. EPSP_synthase.
IPR001986. EPSP_synthase_core.
IPR006264. EPSP_synthase_subgroup.
[Graphical view]
PfamPF00275. EPSP_synthase. 1 hit.
[Graphical view]
PIRSFPIRSF000505. EPSPS. 1 hit.
TIGRFAMsTIGR01356. aroA. 1 hit.
PROSITEPS00104. EPSP_SYNTHASE_1. 1 hit.
PS00885. EPSP_SYNTHASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameAROA_BIFLD
AccessionPrimary (citable) accession number: B3DSQ0
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 22, 2008
Last modified: November 3, 2009
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents