B3DQP7 (B3DQP7_BIFLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-beta-N-acetylglucosaminidase D EMBL ACD97643.1

Gene names

Ordered Locus Names:

BLD_0197

Organism

Bifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]

Taxonomic identifier

205913 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	927 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DQP7 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: B05AAB816353C019	FASTA	927	100,460
	10 20 30 40 50 60 MNKTMTWRRV LAASLAAMLA MSLAACSGGT SATKYTITPE NENEELVLGN RPEASYWFPE 70 80 90 100 110 120 DLLKWNADKD PNLAYNVSTV PLAKRVDKAD LKPVNDTQNT DTKVMAISIM NSSTSGNAPH 130 140 150 160 170 180 GLNTANANTF SYWQYVDELV YWGGSSGEGI IVPPSPDVTD MGHTNGVPVL GTVFFPQNVS 190 200 210 220 230 240 GGKVEWLDQT LAQKSDGSFP VADKLIEVAT TYGFDGWFIN QETEGENETS LGADYATKMQ 250 260 270 280 290 300 AFIAYLKKQA PDLRVVYYDS MTKDGSIDWQ NALTDENSMY MTDGDHPIAD EMFLNFWWTE 310 320 330 340 350 360 DKLAGDDLLA ASATKAKELG IDPYSLYAGI DVQADGYDTP VKWNLFAGKD GKTHTSLGLY 370 380 390 400 410 420 CPSWAYWSAG NPTTFRKNES RLWVNDEGNP SVSTPYEDDE KWTGVSNYVA EQSAVTSLPF 430 440 450 460 470 480 VTNFNNGSGY SFFREGKQIS KMDWNNRSVS DIQPTYRWIV ADEGGNKTKA DYSDADAWYG 490 500 510 520 530 540 GSSLKFSGKV AKDGKTMVKL YSASVKTGAK PTLSIAAKAN VDTDLKAVLT FADGSVETVN 550 560 570 580 590 600 GKKKVGNDWG VIDYDIAKLS NKTLTGIDFT YQSSEDKTGY ELLLGNITLK DGSEETELGK 610 620 630 640 650 660 VTEVKVDDSE FDDDALYAGA RISWKTDGKA PAYEIYQINE DKSRSFLGVS NVENFYANAL 670 680 690 700 710 720 TRVGETNNTT FEIVPVDRYG TQGTSAKADM DWPDNSKPKA GATASRTLLN VGDEVTFTSA 730 740 750 760 770 780 SSKNTAEVAW SLPGSSKEHA TGKSVTVTYD KEGVYDVEIT AKNKSGEATA TLKGQIVVSA 790 800 810 820 830 840 DVMDLVLLSQ GAQVSADGFT NGNEKPEFAV DGDVKTKWCV TGPAPHELVV DLGAPKTVSQ 850 860 870 880 890 900 VDISHAQAGG EDASMNTQEY AIEVSEDGTE YTQVALVKGN TEGATSNAFA PVNARYVKLV 910 920 VNKPTQGSDT AARIYEMQVR GADGAIL

References

[1]

"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth." Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J. BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000605 Genomic DNA. Translation: ACD97643.1.
RefSeq	YP_001954141.1. NC_010816.1.
3D structure databases
ProteinModelPortal	B3DQP7.
ModBase	Search...
Protein-protein interaction databases
STRING	B3DQP7.
Protein family/group databases
CAZy	CBM32. Carbohydrate-Binding Module Family 32. GH85. Glycoside Hydrolase Family 85.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6362679.
GenomeReviews	Gene locus BLD_0197 in contig CP000605_GR.
KEGG	blj:BLD_0197.
PATRIC	21113322. VBIBifLon134794_0218.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG348351.
OMA	YDSMTKD.
ProtClustDB	CLSK872822.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR005201. Glyco_hydro_85. IPR022409. PKD/Chitinase_dom. IPR000601. PKD_dom. [Graphical view]
Gene3D	G3DSA:2.60.40.670. PKD. 1 hit.
Pfam	PF00754. F5_F8_type_C. 1 hit. PF03644. Glyco_hydro_85. 1 hit. PF00801. PKD. 1 hit. [Graphical view]
SMART	SM00089. PKD. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF49299. PKD. 1 hit.
PROSITE	PS50022. FA58C_3. 1 hit. PS50093. PKD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3DQP7_BIFLD

Accession

Primary (citable) accession number: B3DQP7

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)