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B3DQ70 (B3DQ70_BIFLD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:sacA EMBL ACD97569.1
Ordered Locus Names:BLD_0123
OrganismBifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]
Taxonomic identifier205913 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 32 family. RuleBase RU000449

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU000449
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3DQ70 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: F203700772422F49

FASTA51858,091
        10         20         30         40         50         60 
MTDFTPETPV LTPIRDHAAE LAKAEAGVAE MAAKRNNRWY PKYHIASNGG WINDPNGLCF 

        70         80         90        100        110        120 
YKGRWHVFYQ LHPYGTQWGP MHWGHVSSTD MLNWKREPIM FAPSLEQEKD GVFSGSAVID 

       130        140        150        160        170        180 
DNGDLRFYYT GHRWANGHDN TGGDWQVQMT ALPDNDELTS ATKQGMIIDC PTDKVDHHYR 

       190        200        210        220        230        240 
DPKVWKTGDT WYMTFGVSSA DKRGQMWLFS SKDMVRWEYE RVLFQHPDPD VFMLECPDFF 

       250        260        270        280        290        300 
PIKDKDGNEK WVIGFSAMGS KPSGFMNRNV SNAGYMIGTW EPGGEFKPET EFRLWDCGHN 

       310        320        330        340        350        360 
YYAPQSFNVD GRQIVYGWMS PFVQPIPMED DGWCGQLTLP REITLGDDGD VVTAPVAEME 

       370        380        390        400        410        420 
GLREDTLDHG SVTLDMDGEQ IIADDAEAVE IEMTIDLAAS TAERAGLKIH ATEDGAYTYV 

       430        440        450        460        470        480 
AYDGQIGRVV VDRQAMANGD RGYRAAPLTD AELASGKLDL RVFVDRGSVE VYVNGGHQVL 

       490        500        510 
SSYSYASEGP RAIKLVAESG SLKVDSLKLH HMKSIGLE 

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References

[1]"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000605 Genomic DNA. Translation: ACD97569.1.
RefSeqYP_001954067.1. NC_010816.1.

3D structure databases

ProteinModelPortalB3DQ70.
ModBaseSearch...

Protein-protein interaction databases

STRINGB3DQ70.

Protein family/group databases

CAZyGH32. Glycoside Hydrolase Family 32.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6362717.
GenomeReviewsGene locus BLD_0123 in contig CP000605_GR.
KEGGblj:BLD_0123.
PATRIC21113151. VBIBifLon134794_0140.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG693902.
OMADSNAQQV.
ProtClustDBCLSK572494.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR001362. Glyco_hydro_32.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01193.
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3DQ70_BIFLD
AccessionPrimary (citable) accession number: B3DQ70
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)