B3DQ27 (B3DQ27_BIFLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ABC-type transport system permease component EMBL ACD97526.1

Gene names

Ordered Locus Names:

BLD_0080 EMBL ACD97526.1

Organism

Bifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP] EMBL ACD97526.1

Taxonomic identifier

205913 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium › Bifidobacterium longum

Protein attributes

Sequence length	266 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	B3DQ27 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 77DCCECB6D90BFEB	FASTA	266	28,550
	10 20 30 40 50 60 MSGDLGNSYN IDIWGLLIAL GMVAVAAIIS ELMHMGIGKT LMWSSCRALV QLCAMGFIIG 70 80 90 100 110 120 YVIRSNSVWM VFALMAVMLV AAVQIVMSRA RGIPKGLAGP IFLSLVITML LMLALVTELI 130 140 150 160 170 180 VRPHPWYAPQ LVVPLTGMLL GNTVTALAVG LSRFYESMEE RRDEVDMMLA LGATPWESAR 190 200 210 220 230 240 PSIVSSIRLG LLPTTASLAS SGIVTIPGMM AGQVIAGGDP LNAAKYQFVV LDAIAALTLL 250 260 ADGLIMVMIY RTCFTADDQY RPPEAR

References

[1]

"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth." Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J. BMC Genomics 9:247-247(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DJO10A EMBL ACD97526.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000605 Genomic DNA. Translation: ACD97526.1.
RefSeq	YP_001954024.1. NC_010816.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	205913.BLD_0080.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD97526; ACD97526; BLD_0080.
GeneID	6364404.
KEGG	blj:BLD_0080.
PATRIC	21113063. VBIBifLon134794_0097.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0390.
HOGENOM	HOG000260833.
KO	K02069.
OMA	MQPTIDS.
ProtClustDB	CLSK572473.
Enzyme and pathway databases
BioCyc	BLON205913:GJB4-80-MONOMER.
Family and domain databases
InterPro	IPR005226. CHP00245. [Graphical view]
Pfam	PF03649. UPF0014. 1 hit. [Graphical view]
TIGRFAMs	TIGR00245. TIGR00245. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3DQ27_BIFLD

Accession

Primary (citable) accession number: B3DQ27

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)