B3DPX3 (RL10_BIFLD) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10

Gene names

Name:	rplJ
Ordered Locus Names:	BLD_1667

Organism

Bifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]

Taxonomic identifier

205913 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	173 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 173	173	50S ribosomal protein L10 HAMAP MF_00362		PRO_1000120919

Sequences

	Sequence		Length	Mass (Da)
	B3DPX3 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 9A9CCD61218CB191	FASTA	173	18,747
	10 20 30 40 50 60 MKRPEKEAVV AQLTEEFRNA DAVYLTEYRG LTVPQISDLR EKLGRDTSYT VAKNTLARIA 70 80 90 100 110 120 AKEAGIEGLD EILSGPTAIT FVKGDFIEAA KVIRDFAKDN KALVIKGAAA DGTVYDAEGA 130 140 150 160 170 KKLADLKSRP QLLAEFAGDI KASMAKAAYL FNALPTKAVR TIDALREKQE KAA

References

[1]

"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth." Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J. BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DJO10A.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000605 Genomic DNA. Translation: ACD99112.1.
RefSeq	YP_001955610.1. NC_010816.1.
3D structure databases
ProteinModelPortal	B3DPX3.
ModBase	Search...
Protein-protein interaction databases
STRING	B3DPX3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6364494.
GenomeReviews	Gene locus BLD_1667 in contig CP000605_GR.
KEGG	blj:BLD_1667.
PATRIC	21116372. VBIBifLon134794_1695.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG597359.
OMA	GICKVTK.
ProtClustDB	PRK00099.
Family and domain databases
HAMAP	MF_00362. Ribosomal_L10. [Tree]
InterPro	IPR022973. Ribosomal_L10. IPR001790. Ribosomal_L10/acidic_P0. IPR002363. Ribosomal_L10_eubac_CS. [Graphical view]
KO	K02864.
PANTHER	PTHR11560:SF8. PTHR11560:SF8. 1 hit.
Pfam	PF00466. Ribosomal_L10. 1 hit. [Graphical view]
PROSITE	PS01109. RIBOSOMAL_L10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL10_BIFLD

Accession

Primary (citable) accession number: B3DPX3

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	July 22, 2008
Last modified:	January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program