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Protein
Submitted name:

Glycosidase

Gene

BLD_1497

Organism
Bifidobacterium longum (strain DJO10A)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciBLON205913:GJB4-1546-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
GlycosidaseImported
Gene namesi
Ordered Locus Names:BLD_1497Imported
OrganismiBifidobacterium longum (strain DJO10A)Imported
Taxonomic identifieri205913 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000002419 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi205913.BLD_1497.

Structurei

3D structure databases

ProteinModelPortaliB3DP83.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220641.
KOiK01182.
OMAiQFEHITL.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

B3DP83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTFNRAIIP DAIRTNGATP NPWWSNAVVY QIYPRSFQDT NGDGFGDLKG
60 70 80 90 100
ITSRLDYLAD LGVDVLWLSP VYKSPQDDNG YDISDYQDID PLFGTLDDMD
110 120 130 140 150
ELLAEAHKRG LKIVMDLVVN HTSDEHAWFE ASKNKDDEHA DWYWWRPARP
160 170 180 190 200
GTTPGEPGAE PNQWGSYFGG SAWEYCPERG EYFLHQFSKK QPDLNWENPA
210 220 230 240 250
VRRAVYDMMN WWLDRGVDGF RMDVITLISK RTDSNGKLPG EYGSELEDLP
260 270 280 290 300
VGEEGYSNPN PFCADGPRQD EFLAEMRREV FEGREGFLTV GEAPGVTAQR
310 320 330 340 350
NEHITDPGNG ELDMLFLFEH VDFDCEGTKW KPLPLDLPKF KSIMAGYQTA
360 370 380 390 400
VQNAGWASLF TGNHDQPRVV SRWGDDSAEE SRVRSAKALG LMLHMHRGTP
410 420 430 440 450
YIYQGEELGM TDAHFTRLDQ YRDLESLNAY RQRVEEAKVQ SSESMMAGLA
460 470 480 490 500
ARSRDNARTP MQWDGSGYAG FTAPDAATEP WISVNPNHAE INAAGEFDDP
510 520 530 540 550
DSVYSFYKQL VALRHNSPVV AAGDWRLIDA ADPHVYAFTR ELDAEKLLVV
560 570 580 590 600
VNMSSRTVDL PREAAELTAV GIAEPNVVIS TYDAPHTVAS LANRELDPWE

AAVIQL
Length:606
Mass (Da):68,126
Last modified:July 21, 2008 - v1
Checksum:iADBE648C1DCE2534
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000605 Genomic DNA. Translation: ACD98942.1.
RefSeqiYP_001955440.1. NC_010816.1.

Genome annotation databases

EnsemblBacteriaiACD98942; ACD98942; BLD_1497.
KEGGiblj:BLD_1497.
PATRICi21115994. VBIBifLon134794_1515.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000605 Genomic DNA. Translation: ACD98942.1.
RefSeqiYP_001955440.1. NC_010816.1.

3D structure databases

ProteinModelPortaliB3DP83.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205913.BLD_1497.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD98942; ACD98942; BLD_1497.
KEGGiblj:BLD_1497.
PATRICi21115994. VBIBifLon134794_1515.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220641.
KOiK01182.
OMAiQFEHITL.
OrthoDBiEOG6RVFV2.

Enzyme and pathway databases

BioCyciBLON205913:GJB4-1546-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of two cryptic plasmids from Bifidobacterium longum DJO10A and construction of a shuttle cloning vector."
    Lee J.H., O'Sullivan D.J.
    Appl. Environ. Microbiol. 72:527-535(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DJO10AImported.
  2. "Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
    Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
    BMC Genomics 9:247-247(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DJO10AImported.

Entry informationi

Entry nameiB3DP83_BIFLD
AccessioniPrimary (citable) accession number: B3DP83
Entry historyi
Integrated into UniProtKB/TrEMBL: July 21, 2008
Last sequence update: July 21, 2008
Last modified: March 31, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.