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B3DP83 (B3DP83_BIFLD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosidase EMBL ACD98942.1
Gene names
Ordered Locus Names:BLD_1497 EMBL ACD98942.1
OrganismBifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP] EMBL ACD98942.1
Taxonomic identifier205913 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium ›

Protein attributes

Sequence length606 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACD98942.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, acting on glycosyl bonds

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B3DP83 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: ADBE648C1DCE2534

FASTA60668,126
        10         20         30         40         50         60 
MTTFNRAIIP DAIRTNGATP NPWWSNAVVY QIYPRSFQDT NGDGFGDLKG ITSRLDYLAD 

        70         80         90        100        110        120 
LGVDVLWLSP VYKSPQDDNG YDISDYQDID PLFGTLDDMD ELLAEAHKRG LKIVMDLVVN 

       130        140        150        160        170        180 
HTSDEHAWFE ASKNKDDEHA DWYWWRPARP GTTPGEPGAE PNQWGSYFGG SAWEYCPERG 

       190        200        210        220        230        240 
EYFLHQFSKK QPDLNWENPA VRRAVYDMMN WWLDRGVDGF RMDVITLISK RTDSNGKLPG 

       250        260        270        280        290        300 
EYGSELEDLP VGEEGYSNPN PFCADGPRQD EFLAEMRREV FEGREGFLTV GEAPGVTAQR 

       310        320        330        340        350        360 
NEHITDPGNG ELDMLFLFEH VDFDCEGTKW KPLPLDLPKF KSIMAGYQTA VQNAGWASLF 

       370        380        390        400        410        420 
TGNHDQPRVV SRWGDDSAEE SRVRSAKALG LMLHMHRGTP YIYQGEELGM TDAHFTRLDQ 

       430        440        450        460        470        480 
YRDLESLNAY RQRVEEAKVQ SSESMMAGLA ARSRDNARTP MQWDGSGYAG FTAPDAATEP 

       490        500        510        520        530        540 
WISVNPNHAE INAAGEFDDP DSVYSFYKQL VALRHNSPVV AAGDWRLIDA ADPHVYAFTR 

       550        560        570        580        590        600 
ELDAEKLLVV VNMSSRTVDL PREAAELTAV GIAEPNVVIS TYDAPHTVAS LANRELDPWE 


AAVIQL

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References

[1]"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
BMC Genomics 9:247-247(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DJO10A EMBL ACD98942.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000605 Genomic DNA. Translation: ACD98942.1.
RefSeqYP_001955440.1. NC_010816.1.

3D structure databases

ProteinModelPortalB3DP83.
ModBaseSearch...

Protein-protein interaction databases

STRING205913.BLD_1497.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD98942; ACD98942; BLD_1497.
GeneID6363682.
KEGGblj:BLD_1497.
PATRIC21115994. VBIBifLon134794_1515.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000220641.
KOK01182.
OMAIRTNGAT.
ProtClustDBCLSK573111.

Enzyme and pathway databases

BioCycBLON205913:GJB4-1546-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR022567. DUF3459.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF11941. DUF3459. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3DP83_BIFLD
AccessionPrimary (citable) accession number: B3DP83
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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