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B3DNY4 (B3DNY4_BIFLD) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ppc EMBL ACD98843.1
Ordered Locus Names:BLD_1398 EMBL ACD98843.1
OrganismBifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP] EMBL ACD98843.1
Taxonomic identifier205913 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length917 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS021135

Cofactor

Magnesium By similarity. SAAS SAAS021135

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B3DNY4 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: FE266BC9E7CC069C

FASTA917102,604
        10         20         30         40         50         60 
MATPEEQITP ADAAIVTTGT GRKGPEEHDL PESLKYDMDL CLEILRNVLG EYNPELLSTF 

        70         80         90        100        110        120 
DTVRHYAVEA SAEHFAELKD PNPDQDGLKE AVNVIDNMTL HDAQLLARAF ATYFHLANLS 

       130        140        150        160        170        180 
EENYRVSVLH ERENNVPVDQ AVDPINELTV AYHQLINETG PAKAKELLNQ LEFHPVFTAH 

       190        200        210        220        230        240 
PTEARRKAVE GKIRRVSELL EEYKRLGGSD KKECLRRLYN EIDALFRTSP IALKKPTPVE 

       250        260        270        280        290        300 
EADTILDIFD NTLFNTIPKV YRRFDDWVLG DKAGLVEPAC PAFFHPGSWI GSDRDGNPNV 

       310        320        330        340        350        360 
TAKVSRAVAR KFSDHVIAAL EEATRTVGRN LTMEAETTPP SAELKSLWSH QKEMSERLTD 

       370        380        390        400        410        420 
KAALISTKEM HRAVMLVMAD RLHYTIERDA DLMYHSCDDF LADLKVVQRS LAAAGAKRSA 

       430        440        450        460        470        480 
YGPLQDLIWQ TETFGFHMVE MEFRQHSVVH ARALADIREH GLHGERGELQ PMTHEVLDTF 

       490        500        510        520        530        540 
RALGAIQKRN GLKAARRYII SFTKSAQNIK DVYELNRLAF SHPEDVPTID VIPLFEQLED 

       550        560        570        580        590        600 
LQNSVDVLEE MIKIPEVQAR LKATGNKLEV MLGYSDSSKD AGPTSATLAL HSAQERIAKW 

       610        620        630        640        650        660 
AESHDIDLTL FHGRGGAVGR GGGPANRAVL AQPVGSVKCR FKLTEQGEVI FARYGNPVLA 

       670        680        690        700        710        720 
IRHVESVAAA TLLQSAPSVE KRNTEMTEKY ADMAAQLDEA AHNRFLDLLN TDGFAPWFSI 

       730        740        750        760        770        780 
VTPLTEIGLL PIGSRPAKRG LGAKSLDDLR TIPWIFSWAQ ARINLAAWYG LGTACEKFGD 

       790        800        810        820        830        840 
LETMRQAYEE WPLFSTFIDN IEMSIAKTDE RIARMYLALG DREDLNEKVL NEMELTRKWV 

       850        860        870        880        890        900 
LAIVGDKWPL QHRHVLGQAI RIRSPYVDAL SVTQVLALKS LRKKVDKEEL SQSQQAGFIY 

       910 
LILCTVSGVA AGLQNTG 

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References

[1]"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
BMC Genomics 9:247-247(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DJO10A EMBL ACD98843.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000605 Genomic DNA. Translation: ACD98843.1.
RefSeqYP_001955341.1. NC_010816.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING205913.BLD_1398.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD98843; ACD98843; BLD_1398.
GeneID6364111.
KEGGblj:BLD_1398.
PATRIC21115794. VBIBifLon134794_1418.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238647.
KOK01595.
OMAAIPWVFG.
OrthoDBEOG6TJ7T8.
ProtClustDBCLSK813908.

Enzyme and pathway databases

BioCycBLON205913:GJB4-1444-MONOMER.

Family and domain databases

InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3DNY4_BIFLD
AccessionPrimary (citable) accession number: B3DNY4
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: December 11, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)