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B3DNY4

- B3DNY4_BIFLD

UniProt

B3DNY4 - B3DNY4_BIFLD

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Protein
Submitted name:

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Bifidobacterium longum (strain DJO10A)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.SAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.SAAS annotation

Cofactori

Note: Magnesium.SAAS annotation

GO - Molecular functioni

  1. phosphoenolpyruvate carboxylase activity Source: InterPro

GO - Biological processi

  1. carbon fixation Source: UniProtKB-KW
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationSAAS annotation

Keywords - Ligandi

MagnesiumSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciBLON205913:GJB4-1444-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphoenolpyruvate carboxylaseImported
Gene namesi
Name:ppcImported
Ordered Locus Names:BLD_1398Imported
OrganismiBifidobacterium longum (strain DJO10A)Imported
Taxonomic identifieri205913 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000002419: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi205913.BLD_1398.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiELSTISC.
OrthoDBiEOG6TJ7T8.

Family and domain databases

InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3DNY4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATPEEQITP ADAAIVTTGT GRKGPEEHDL PESLKYDMDL CLEILRNVLG
60 70 80 90 100
EYNPELLSTF DTVRHYAVEA SAEHFAELKD PNPDQDGLKE AVNVIDNMTL
110 120 130 140 150
HDAQLLARAF ATYFHLANLS EENYRVSVLH ERENNVPVDQ AVDPINELTV
160 170 180 190 200
AYHQLINETG PAKAKELLNQ LEFHPVFTAH PTEARRKAVE GKIRRVSELL
210 220 230 240 250
EEYKRLGGSD KKECLRRLYN EIDALFRTSP IALKKPTPVE EADTILDIFD
260 270 280 290 300
NTLFNTIPKV YRRFDDWVLG DKAGLVEPAC PAFFHPGSWI GSDRDGNPNV
310 320 330 340 350
TAKVSRAVAR KFSDHVIAAL EEATRTVGRN LTMEAETTPP SAELKSLWSH
360 370 380 390 400
QKEMSERLTD KAALISTKEM HRAVMLVMAD RLHYTIERDA DLMYHSCDDF
410 420 430 440 450
LADLKVVQRS LAAAGAKRSA YGPLQDLIWQ TETFGFHMVE MEFRQHSVVH
460 470 480 490 500
ARALADIREH GLHGERGELQ PMTHEVLDTF RALGAIQKRN GLKAARRYII
510 520 530 540 550
SFTKSAQNIK DVYELNRLAF SHPEDVPTID VIPLFEQLED LQNSVDVLEE
560 570 580 590 600
MIKIPEVQAR LKATGNKLEV MLGYSDSSKD AGPTSATLAL HSAQERIAKW
610 620 630 640 650
AESHDIDLTL FHGRGGAVGR GGGPANRAVL AQPVGSVKCR FKLTEQGEVI
660 670 680 690 700
FARYGNPVLA IRHVESVAAA TLLQSAPSVE KRNTEMTEKY ADMAAQLDEA
710 720 730 740 750
AHNRFLDLLN TDGFAPWFSI VTPLTEIGLL PIGSRPAKRG LGAKSLDDLR
760 770 780 790 800
TIPWIFSWAQ ARINLAAWYG LGTACEKFGD LETMRQAYEE WPLFSTFIDN
810 820 830 840 850
IEMSIAKTDE RIARMYLALG DREDLNEKVL NEMELTRKWV LAIVGDKWPL
860 870 880 890 900
QHRHVLGQAI RIRSPYVDAL SVTQVLALKS LRKKVDKEEL SQSQQAGFIY
910
LILCTVSGVA AGLQNTG
Length:917
Mass (Da):102,604
Last modified:July 22, 2008 - v1
Checksum:iFE266BC9E7CC069C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000605 Genomic DNA. Translation: ACD98843.1.
RefSeqiYP_001955341.1. NC_010816.1.

Genome annotation databases

EnsemblBacteriaiACD98843; ACD98843; BLD_1398.
GeneIDi6364111.
KEGGiblj:BLD_1398.
PATRICi21115794. VBIBifLon134794_1418.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000605 Genomic DNA. Translation: ACD98843.1 .
RefSeqi YP_001955341.1. NC_010816.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 205913.BLD_1398.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD98843 ; ACD98843 ; BLD_1398 .
GeneIDi 6364111.
KEGGi blj:BLD_1398.
PATRICi 21115794. VBIBifLon134794_1418.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi ELSTISC.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci BLON205913:GJB4-1444-MONOMER.

Family and domain databases

InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 2 hits.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of two cryptic plasmids from Bifidobacterium longum DJO10A and construction of a shuttle cloning vector."
    Lee J.H., O'Sullivan D.J.
    Appl. Environ. Microbiol. 72:527-535(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DJO10AImported.
  2. "Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
    Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
    BMC Genomics 9:247-247(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DJO10AImported.

Entry informationi

Entry nameiB3DNY4_BIFLD
AccessioniPrimary (citable) accession number: B3DNY4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: November 26, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3