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B3DNY4

- B3DNY4_BIFLD

UniProt

B3DNY4 - B3DNY4_BIFLD

Protein
Submitted name:

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Bifidobacterium longum (strain DJO10A)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (22 Jul 2008)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.SAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.SAAS annotation

    Cofactori

    Magnesium.SAAS annotation

    GO - Molecular functioni

    1. phosphoenolpyruvate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-KW
    2. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseSAAS annotation

    Keywords - Biological processi

    Carbon dioxide fixationSAAS annotation

    Keywords - Ligandi

    MagnesiumSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciBLON205913:GJB4-1444-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Phosphoenolpyruvate carboxylaseImported
    Gene namesi
    Name:ppcImported
    Ordered Locus Names:BLD_1398Imported
    OrganismiBifidobacterium longum (strain DJO10A)Imported
    Taxonomic identifieri205913 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000002419: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi205913.BLD_1398.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238647.
    KOiK01595.
    OMAiELSTISC.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 2 hits.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3DNY4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATPEEQITP ADAAIVTTGT GRKGPEEHDL PESLKYDMDL CLEILRNVLG    50
    EYNPELLSTF DTVRHYAVEA SAEHFAELKD PNPDQDGLKE AVNVIDNMTL 100
    HDAQLLARAF ATYFHLANLS EENYRVSVLH ERENNVPVDQ AVDPINELTV 150
    AYHQLINETG PAKAKELLNQ LEFHPVFTAH PTEARRKAVE GKIRRVSELL 200
    EEYKRLGGSD KKECLRRLYN EIDALFRTSP IALKKPTPVE EADTILDIFD 250
    NTLFNTIPKV YRRFDDWVLG DKAGLVEPAC PAFFHPGSWI GSDRDGNPNV 300
    TAKVSRAVAR KFSDHVIAAL EEATRTVGRN LTMEAETTPP SAELKSLWSH 350
    QKEMSERLTD KAALISTKEM HRAVMLVMAD RLHYTIERDA DLMYHSCDDF 400
    LADLKVVQRS LAAAGAKRSA YGPLQDLIWQ TETFGFHMVE MEFRQHSVVH 450
    ARALADIREH GLHGERGELQ PMTHEVLDTF RALGAIQKRN GLKAARRYII 500
    SFTKSAQNIK DVYELNRLAF SHPEDVPTID VIPLFEQLED LQNSVDVLEE 550
    MIKIPEVQAR LKATGNKLEV MLGYSDSSKD AGPTSATLAL HSAQERIAKW 600
    AESHDIDLTL FHGRGGAVGR GGGPANRAVL AQPVGSVKCR FKLTEQGEVI 650
    FARYGNPVLA IRHVESVAAA TLLQSAPSVE KRNTEMTEKY ADMAAQLDEA 700
    AHNRFLDLLN TDGFAPWFSI VTPLTEIGLL PIGSRPAKRG LGAKSLDDLR 750
    TIPWIFSWAQ ARINLAAWYG LGTACEKFGD LETMRQAYEE WPLFSTFIDN 800
    IEMSIAKTDE RIARMYLALG DREDLNEKVL NEMELTRKWV LAIVGDKWPL 850
    QHRHVLGQAI RIRSPYVDAL SVTQVLALKS LRKKVDKEEL SQSQQAGFIY 900
    LILCTVSGVA AGLQNTG 917
    Length:917
    Mass (Da):102,604
    Last modified:July 22, 2008 - v1
    Checksum:iFE266BC9E7CC069C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000605 Genomic DNA. Translation: ACD98843.1.
    RefSeqiYP_001955341.1. NC_010816.1.

    Genome annotation databases

    EnsemblBacteriaiACD98843; ACD98843; BLD_1398.
    GeneIDi6364111.
    KEGGiblj:BLD_1398.
    PATRICi21115794. VBIBifLon134794_1418.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000605 Genomic DNA. Translation: ACD98843.1 .
    RefSeqi YP_001955341.1. NC_010816.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 205913.BLD_1398.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACD98843 ; ACD98843 ; BLD_1398 .
    GeneIDi 6364111.
    KEGGi blj:BLD_1398.
    PATRICi 21115794. VBIBifLon134794_1418.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238647.
    KOi K01595.
    OMAi ELSTISC.
    OrthoDBi EOG6TJ7T8.

    Enzyme and pathway databases

    BioCyci BLON205913:GJB4-1444-MONOMER.

    Family and domain databases

    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 2 hits.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of two cryptic plasmids from Bifidobacterium longum DJO10A and construction of a shuttle cloning vector."
      Lee J.H., O'Sullivan D.J.
      Appl. Environ. Microbiol. 72:527-535(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DJO10AImported.
    2. "Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth."
      Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J.
      BMC Genomics 9:247-247(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DJO10AImported.

    Entry informationi

    Entry nameiB3DNY4_BIFLD
    AccessioniPrimary (citable) accession number: B3DNY4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 22, 2008
    Last sequence update: July 22, 2008
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3