B3DNS5 (B3DNS5_BIFLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-L-arabinofuranosidase EMBL ACD98784.1

Gene names

Name:	abfA3 EMBL ACD98784.1
Ordered Locus Names:	BLD_1339

Organism

Bifidobacterium longum (strain DJO10A) [Complete proteome] [HAMAP]

Taxonomic identifier

205913 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium

Protein attributes

Sequence length	515 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DNS5 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 210E7A5BBF7A6E1E	FASTA	515	56,565
	10 20 30 40 50 60 MPQQDHLTAR LVVDDDFEVA PVNNRLFGSF VEHLGRCVYT GIYEPDHPTA DEHGFRKDVI 70 80 90 100 110 120 DLVKELGATT IRYPGGNFVS GYRWEDGIGP KQERPRRLDL AWHSSETNEF GLHEMAEWLE 130 140 150 160 170 180 ATGGNELMEA VNLGTRGLQE ALDLLEYANV PGGTELSERR RANGADKPFD IRMWCLGNEM 190 200 210 220 230 240 DGPWQLGHKS AEDYGMLAAS VAAGMRQIDP DVELVVCGSS AHGMPTFGKW EQTVLEKTYE 250 260 270 280 290 300 NVNFVSCHAY YQPFFKEDGT RDMASFLASG VDMDGFIKDV AATIDATKAH LKSAHDVYIS 310 320 330 340 350 360 FDEWNVWYQG EEPSKTPEGI GNWPVAPRLL EDIYTAADAV VFGDLMITLL KNADRVRAAS 370 380 390 400 410 420 LAQLVNVIAP IMTEPGGPAW RQTTFHPFSV TARLAKGGTV LEPKLSAGTV DTPRYGEVDG 430 440 450 460 470 480 VNAVAVRCAD GSLAVFAVNR SLEATAEFEI RLQDGAQPAS VEAQTLHDDD LFAANTLYDQ 490 500 510 NRVTPHANGS AMYDAESGVV RVSLPPVSWT ALHIK

References

[1]

"Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth." Lee J.H., Karamychev V.N., Kozyavkin S.A., Mills D., Pavlov A.R., Pavlova N.V., Polouchine N.N., Richardson P.M., Shakhova V.V., Slesarev A.I., Weimer B., O'Sullivan D.J. BMC Genomics 9:247-247(2008) [PubMed: 18505588] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000605 Genomic DNA. Translation: ACD98784.1.
RefSeq	YP_001955282.1. NC_010816.1.
3D structure databases
ProteinModelPortal	B3DNS5.
ModBase	Search...
Protein-protein interaction databases
STRING	B3DNS5.
Protein family/group databases
CAZy	GH51. Glycoside Hydrolase Family 51.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6363517.
GenomeReviews	Gene locus BLD_1339 in contig CP000605_GR.
KEGG	blj:BLD_1339.
PATRIC	21115668. VBIBifLon134794_1357.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG654651.
OMA	WQLGHKS.
ProtClustDB	CLSK813905.
Family and domain databases
InterPro	IPR010720. Alpha-L-AF_C. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01209.
Pfam	PF06964. Alpha-L-AF_C. 1 hit. [Graphical view]
SMART	SM00813. Alpha-L-AF_C. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3DNS5_BIFLD

Accession

Primary (citable) accession number: B3DNS5

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)