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B3DM90

- B3DM90_RAT

UniProt

B3DM90 - B3DM90_RAT

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Protein
Submitted name: Ncstn protein
Gene
Ncstn, rCG_20460
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. endopeptidase activity Source: Ensembl

GO - Biological processi

  1. T cell proliferation Source: Ensembl
  2. beta-amyloid metabolic process Source: Ensembl
  3. epithelial cell proliferation Source: Ensembl
  4. myeloid cell homeostasis Source: Ensembl
  5. protein processing Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ncstn proteinImported
Submitted name:
Nicastrin, isoform CRA_bImported
Gene namesi
Name:NcstnImported
ORF Names:rCG_20460Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi631418. Ncstn.

Subcellular locationi

GO - Cellular componenti

  1. Golgi apparatus Source: Ensembl
  2. endoplasmic reticulum Source: Ensembl
  3. integral component of membrane Source: InterPro
  4. plasma membrane Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriB3DM90.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG006497.
KOiK06171.

Family and domain databases

InterProiIPR008710. Nicastrin.
[Graphical view]
PANTHERiPTHR21092. PTHR21092. 1 hit.
PfamiPF05450. Nicastrin. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3DM90-1 [UniParc]FASTAAdd to Basket

« Hide

MEKLKGETSR IAGLAVTLAK PNSTSSFSPS VQCPNDGFGI YSNSYGPEFA    50
HCKKTLWNEL GNGLAYDDFS FPIFLLEDEN ETKVIKQCYQ DHNLGQNGSA 100
PSFPLCAMQL FSHMHAVIST ATCMRRSFIQ STFSINPEIV CDPLSDYNVW 150
SMLKPINTSG GLEPDVRVVV AATRLDSRSF FWNVAPGAES AVASFVTQLA 200
AAEALHKAPD VTTLPRNVMF VFFQGETFDY IGSSRMVYDM ENGKFPVRLE 250
NIDSFVELGQ VALRTSLELW MHTDPMSQKN ESVKNQVEDL LVTLEQSGAD 300
TPQVVLSRLV QSQALPPSSL QRFLRARNIS GVVLADHSGS FHNRYYQSIY 350
DTAENINVTY PESQSPEEDL NFVTDTAKAL ADVATVLARA LYKLAGGTNF 400
NNSIQADPQT VTRLLYGFLV RANNSWFQSI LRHDLRSYLD DGPLQHYIAV 450
SSPTNTTYVV QYALANLTGK VTNLTQEQCQ DPSKVPNESK DLYEYSWVQG 500
PWNSNKTERL PRCVRSTVRL ARALSPAFEL SQWSSTEYST WAESRWKDIQ 550
ARIFLIASKE LEFITLIVGF SILVFSLIVT YCINAKADVL FVAPREPGAV 600
SY 602
Length:602
Mass (Da):67,170
Last modified:July 22, 2008 - v1
Checksum:i948EF31880423A57
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC167747 mRNA. Translation: AAI67747.1.
CH473985 Genomic DNA. Translation: EDL94676.1.
RefSeqiXP_006250345.1. XM_006250283.1.
UniGeneiRn.51975.

Genome annotation databases

GeneIDi289231.
KEGGirno:289231.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC167747 mRNA. Translation: AAI67747.1 .
CH473985 Genomic DNA. Translation: EDL94676.1 .
RefSeqi XP_006250345.1. XM_006250283.1.
UniGenei Rn.51975.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 289231.
KEGGi rno:289231.

Organism-specific databases

CTDi 23385.
RGDi 631418. Ncstn.

Phylogenomic databases

HOVERGENi HBG006497.
KOi K06171.

Miscellaneous databases

NextBioi 35565078.

Gene expression databases

Genevestigatori B3DM90.

Family and domain databases

InterProi IPR008710. Nicastrin.
[Graphical view ]
PANTHERi PTHR21092. PTHR21092. 1 hit.
Pfami PF05450. Nicastrin. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.

Entry informationi

Entry nameiB3DM90_RAT
AccessioniPrimary (citable) accession number: B3DM90
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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