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B3DM72

- B3DM72_XENTR

UniProt

B3DM72 - B3DM72_XENTR

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Protein
Submitted name:

LOC100170618 protein

Gene
tgm2, LOC100170618
Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

Cofactori

Binds 1 calcium ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei277 – 2771 By similarityUniRule annotation
Active sitei335 – 3351 By similarityUniRule annotation
Active sitei358 – 3581 By similarityUniRule annotation
Metal bindingi398 – 3981Calcium By similarityUniRule annotation
Metal bindingi400 – 4001Calcium By similarityUniRule annotation
Metal bindingi446 – 4461Calcium By similarityUniRule annotation
Metal bindingi451 – 4511Calcium By similarityUniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

GO - Biological processi

  1. peptide cross-linking Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100170618 proteinImported
Gene namesi
Name:tgm2Imported
Synonyms:LOC100170618Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-5940894. tgm2.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000037729.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG80379.
HOGENOMiHOG000231695.
HOVERGENiHBG004342.
KOiK05625.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3DM72-1 [UniParc]FASTAAdd to Basket

« Hide

MAEELYLESF DLDCSGNNRS HRTAEATCER LIVRRGQPFQ ITLNFSPRGY    50
EEGVDKLSLN AVTGPCPSEE SGTSNHIPVS DALQDGAWSA AITSTDGGTL 100
ILSITSPPDA RIGYYNLSLE TSTEYQGSSF QLGSFTLLFN PWCPEDSVYL 150
ETEEERKEYV LCQHGIIFQG TKDSVEHVPW NFGQFEDEIL DITLQVLDTS 200
PKFLNDSNRD CSRRNDPVYI SRVISAMVNC NDDRGVLFGR WDNKYDDGIS 250
PMFWMGSVAI LRRWRKFSCQ AVKYGQCWVY AAVACTVLRC LGIPARVITN 300
YNSAHDTNSN LLIEQYLDEH GKRQPKQKEI IWNYHCWTEA WMTRPDLGEA 350
YNGWQVVDPT PQEKSEGTYC CGPTPVKAVK EGDLNLKYDV PFVFAEVNAD 400
VVYFVQQNDG SVKKTQFISL VGQKISTKAI GKDEREDITL NYKYPEGSED 450
ERRVFEKANK QSEAEEERVE TPSDFTIKIK VSEGMNKGSD FDVFAVITNN 500
REEEKQCRLM FCARTCSYTG EVGPECGMKD LLNLTLTPQE EKRVPLRILY 550
EKYGPTMTEN NTIKLVAMLY DYSSKEIILA VRDIHVKNPS IKIKVLGEPK 600
QKRKLVAEIS LKNPLAEPLT GCCFTVEGAG LTAEQLVKTL DCPVEPGQEA 650
KVRVDLMPQL AGKLSLVVDF ESDLLKAVKG YRNIIIAPLP K 691
Length:691
Mass (Da):77,879
Last modified:July 22, 2008 - v1
Checksum:i7F03CB6BC0080527
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC167727 mRNA. Translation: AAI67727.1.
RefSeqiNP_001123852.1. NM_001130380.1.
UniGeneiStr.16090.

Genome annotation databases

GeneIDi100170618.
KEGGixtr:100170618.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC167727 mRNA. Translation: AAI67727.1 .
RefSeqi NP_001123852.1. NM_001130380.1.
UniGenei Str.16090.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 8364.ENSXETP00000037729.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100170618.
KEGGi xtr:100170618.

Organism-specific databases

CTDi 7052.
Xenbasei XB-GENE-5940894. tgm2.

Phylogenomic databases

eggNOGi NOG80379.
HOGENOMi HOG000231695.
HOVERGENi HBG004342.
KOi K05625.

Family and domain databases

Gene3Di 2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view ]
PANTHERi PTHR11590. PTHR11590. 1 hit.
Pfami PF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
SMARTi SM00460. TGc. 1 hit.
[Graphical view ]
SUPFAMi SSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: TestesImported.

Entry informationi

Entry nameiB3DM72_XENTR
AccessioniPrimary (citable) accession number: B3DM72
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: July 9, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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