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B3DM72

- B3DM72_XENTR

UniProt

B3DM72 - B3DM72_XENTR

Protein
Submitted name:

LOC100170618 protein

Gene

tgm2

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (22 Jul 2008)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei277 – 2771UniRule annotation
    Active sitei335 – 3351UniRule annotation
    Active sitei358 – 3581UniRule annotation
    Metal bindingi398 – 3981Calcium
    Metal bindingi400 – 4001Calcium
    Metal bindingi446 – 4461Calcium
    Metal bindingi451 – 4511Calcium

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

    GO - Biological processi

    1. peptide cross-linking Source: InterPro

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    LOC100170618 proteinImported
    Gene namesi
    Name:tgm2Imported
    Synonyms:LOC100170618Imported
    OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
    Taxonomic identifieri8364 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

    Organism-specific databases

    XenbaseiXB-GENE-5940894. tgm2.

    Interactioni

    Protein-protein interaction databases

    STRINGi8364.ENSXETP00000037729.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG80379.
    HOGENOMiHOG000231695.
    HOVERGENiHBG004342.
    KOiK05625.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    B3DM72-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEELYLESF DLDCSGNNRS HRTAEATCER LIVRRGQPFQ ITLNFSPRGY    50
    EEGVDKLSLN AVTGPCPSEE SGTSNHIPVS DALQDGAWSA AITSTDGGTL 100
    ILSITSPPDA RIGYYNLSLE TSTEYQGSSF QLGSFTLLFN PWCPEDSVYL 150
    ETEEERKEYV LCQHGIIFQG TKDSVEHVPW NFGQFEDEIL DITLQVLDTS 200
    PKFLNDSNRD CSRRNDPVYI SRVISAMVNC NDDRGVLFGR WDNKYDDGIS 250
    PMFWMGSVAI LRRWRKFSCQ AVKYGQCWVY AAVACTVLRC LGIPARVITN 300
    YNSAHDTNSN LLIEQYLDEH GKRQPKQKEI IWNYHCWTEA WMTRPDLGEA 350
    YNGWQVVDPT PQEKSEGTYC CGPTPVKAVK EGDLNLKYDV PFVFAEVNAD 400
    VVYFVQQNDG SVKKTQFISL VGQKISTKAI GKDEREDITL NYKYPEGSED 450
    ERRVFEKANK QSEAEEERVE TPSDFTIKIK VSEGMNKGSD FDVFAVITNN 500
    REEEKQCRLM FCARTCSYTG EVGPECGMKD LLNLTLTPQE EKRVPLRILY 550
    EKYGPTMTEN NTIKLVAMLY DYSSKEIILA VRDIHVKNPS IKIKVLGEPK 600
    QKRKLVAEIS LKNPLAEPLT GCCFTVEGAG LTAEQLVKTL DCPVEPGQEA 650
    KVRVDLMPQL AGKLSLVVDF ESDLLKAVKG YRNIIIAPLP K 691
    Length:691
    Mass (Da):77,879
    Last modified:July 22, 2008 - v1
    Checksum:i7F03CB6BC0080527
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC167727 mRNA. Translation: AAI67727.1.
    RefSeqiNP_001123852.1. NM_001130380.1.
    UniGeneiStr.16090.

    Genome annotation databases

    GeneIDi100170618.
    KEGGixtr:100170618.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC167727 mRNA. Translation: AAI67727.1 .
    RefSeqi NP_001123852.1. NM_001130380.1.
    UniGenei Str.16090.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 8364.ENSXETP00000037729.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100170618.
    KEGGi xtr:100170618.

    Organism-specific databases

    CTDi 7052.
    Xenbasei XB-GENE-5940894. tgm2.

    Phylogenomic databases

    eggNOGi NOG80379.
    HOGENOMi HOG000231695.
    HOVERGENi HBG004342.
    KOi K05625.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. NIH - Xenopus Gene Collection (XGC) project
      Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: TestesImported.

    Entry informationi

    Entry nameiB3DM72_XENTR
    AccessioniPrimary (citable) accession number: B3DM72
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 22, 2008
    Last sequence update: July 22, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)