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Protein
Submitted name:

LOC100170542 protein

Gene

LOC100170542

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100170542 proteinImported
Gene namesi
Name:LOC100170542Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

PTM / Processingi

Keywords - PTMi

PhosphoproteinSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliB3DLS2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 PH domain.UniRule annotation

Keywords - Domaini

SH2 domainSAAS annotation

Phylogenomic databases

HOVERGENiHBG108516.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
3.30.505.10. 1 hit.
InterProiIPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR000980. SH2.
[Graphical view]
PfamiPF00169. PH. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
SM00252. SH2. 1 hit.
[Graphical view]
SUPFAMiSSF55550. SSF55550. 1 hit.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
PS50001. SH2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B3DLS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAPPSPRT GSPKAQLPPC YYEGYLEKRG AKEKVARRLW TCLCGNTLYF
60 70 80 90 100
YNNPKDTHYV EKLDLSGFVS LIDDPSRDRN LEAARLNLRM KDGEIKLTAP
110 120 130 140 150
SLEARELWKG FLYSVVDLAV PTTLTLLPGQ LHMLREVVEK EKMRRKARAS
160 170 180 190 200
SRAPSSPLSL PLVGEIPACF RPVSRIEAEV LLERHPDCGN MLLRPGRDGS
210 220 230 240 250
SLAVTTRQDL NGSVFRHYRV TQKQQGGYII DVENPIPCPT LHDVINALVE
260 270 280 290 300
KTAGTLQPFI LEEPYEENIT FVSSNDENGE RTLHCAPTGF LSRAPSLPPK
310 320 330 340 350
QVGTDKWSLR SQTRSPSPSP RSFSPSGSPS NSMRRLVLSP SPLSQSLTDE
360
LKQKLEKRRT SQE
Length:363
Mass (Da):40,533
Last modified:July 22, 2008 - v1
Checksum:iC1B31D0A588D9F18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC167557 mRNA. Translation: AAI67557.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC167557 mRNA. Translation: AAI67557.1.

3D structure databases

ProteinModelPortaliB3DLS2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG108516.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
3.30.505.10. 1 hit.
InterProiIPR001849. PH_domain.
IPR011993. PH_like_dom.
IPR000980. SH2.
[Graphical view]
PfamiPF00169. PH. 1 hit.
[Graphical view]
SMARTiSM00233. PH. 1 hit.
SM00252. SH2. 1 hit.
[Graphical view]
SUPFAMiSSF55550. SSF55550. 1 hit.
PROSITEiPS50003. PH_DOMAIN. 1 hit.
PS50001. SH2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: N6Imported.
    Tissue: SpleenImported.

Entry informationi

Entry nameiB3DLS2_XENTR
AccessioniPrimary (citable) accession number: B3DLS2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: June 24, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.