B3DK94 (B3DK94_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Intraflagellar transport 172 EMBL AAI63767.1

Gene names

Name:

ift172 ZFIN ZDB-GENE-040827-1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI63767.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	1745 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Cell projection Cilium Flagellum EMBL AAI63767.1
Gene Ontology (GO)
Biological process	photoreceptor cell maintenance Inferred from mutant phenotype. Source: ZFIN regulation of TOR signaling cascade Inferred from mutant phenotype. Source: ZFIN
Cellular component	flagellum Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DK94 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 2FC2F3B387FA98D4	FASTA	1,745	197,724
	10 20 30 40 50 60 MQLKYMKTLL TPQDGAAKVT CMAWAPNNAK FAVCTIDRVV ILYDEQGEKR DRFTTKPADP 70 80 90 100 110 120 KYGKKTYVVK SMAFSPDSTK IAVAQTDNII FVYKIGEEWG DKKVICNKFI QTSAVTSLVW 130 140 150 160 170 180 PSEHAIIFGL AEGKVRQANT KTSKSSTIYG TDSYVVSLTS NVSGKGILSG HADGTVVRYF 190 200 210 220 230 240 IDDEGSGESQ GKLLTHACPP YALAWGTNSI IVAGCDKKIV AYGKEGNVIQ TFDYSRDRAE 250 260 270 280 290 300 KEFTVAASSP SGQSIVVGSF DRLRVFNWSP RKGTWDESSP KEIPNLYTIT ALSWKKDGSR 310 320 330 340 350 360 LSVGTLCGGV EMFDCCLRRS IYKNKFEMTY VGLSQVIVRN LSTGTRVVLK SQYGYEIDEV 370 380 390 400 410 420 KVMGKDQYLV AHTSDTLLLG DLVSNKLSEV AWQGSGGNEK FFFENETVCM IFNAGELALV 430 440 450 460 470 480 EYGSNDILGS VRTEFINPHL ISVRLNERRQ RGVEDNKKLA YLIDIKTIAI VDLVGGYNLG 490 500 510 520 530 540 TISHDSKIDW LELNETGRKL LFRDKKLRLH LYDIESSVKS TMLSFCPYVQ WVPGSDVVVA 550 560 570 580 590 600 QNRGNLCVWY TIDSPERVTM FPLKGDIVDL ERSNGKTEVI VNEGVNSISY TLDEGLIEFG 610 620 630 640 650 660 TAIDDGDYYR ATAFLETLEM SAETEAMWKT LSKLSLEAQQ LHIAERCFAA LGDVSKARFL 670 680 690 700 710 720 NETNKIADAV AKEYDGDGTD HYQVKARLAM LDKNFKLAEM YYMEQNAVDE VMEMYQELHM 730 740 750 760 770 780 WDECIAVAEG KGHPELDNLR RSYYSYLMET NQNEKAAEVK ENEGDFTGAV NLYLKAGLPA 790 800 810 820 830 840 KAAWLAMSKD ELLSSQDIIS RITAALIKGE FYERAGDLFE RTRNNQRALE CYRKGNAFKK 850 860 870 880 890 900 AVDLARVAFP AEVVKLEEVW GDYLVQQKQM DAAINHYIEA GRSTKAIEAA IAARQWKKAL 910 920 930 940 950 960 HILELQEDRT AAKYYLKIAQ HYASLQEFEV AERLFVKGDH IKDAIDMYTQ AGRWEQAHKL 970 980 990 1000 1010 1020 AVKCMTQEDV SVLYVSRAQE LEKEGKYKEA ERLFTTVDEP DLAITMYKKN KMYDDMIRLV 1030 1040 1050 1060 1070 1080 AVHHKDLLQE THIHLAKELE AESRFQEAEY HYLEGQDWKA AVNMYRVNDM WEEAYRIAKT 1090 1100 1110 1120 1130 1140 HGGANAHKQV AYLWAKSLGG EAAVKLLNKF GLLETAIDFA ADNYTFDFAF ELARLSMKQK 1150 1160 1170 1180 1190 1200 IPDIHLKNAM FLEDQGNFNE AEIEFIKAGK PKEAVLMHVH NKDWSNAQRV AEAHDPESVA 1210 1220 1230 1240 1250 1260 DILVSQAKFC FDQKEFQKAE AFLLRAQRPE LAIKYYKDAG MWTDAMRICK DYLPSKLSVL 1270 1280 1290 1300 1310 1320 QKEYESEGNW GVEGMIEQAQ EWEQTGDYSR AVDCYLKVKD SSNLDLLLKC WMKAAELAIK 1330 1340 1350 1360 1370 1380 FLSHDKAVDV SQIVGPRLIQ LRKYNEAAEL YLNLDLIKNA IDAFIEGEEW NKAKRVAKEL 1390 1400 1410 1420 1430 1440 DPRLEEYVDK RYKEHLKNQG KVDSLVGVDV VAALDMYAER GQWEKCIDTA SKQNFKVLHK 1450 1460 1470 1480 1490 1500 YIALYATHLI KEGEVEKVLS LYIQHGVPAY SQNFNIYKRM FQELVNLRDR DCAEAFRMWS 1510 1520 1530 1540 1550 1560 DLRDVLLLLC ENLTKSSEAN SPAHEEFEQM LLVAHYYATR SAAKGIDQLS SVAAKLSISL 1570 1580 1590 1600 1610 1620 LRHTELIPAD KAFYEAGLAA KAVGWENMAF IFLNRFLDLA DGIDEGTLDA LDHTDFQDTD 1630 1640 1650 1660 1670 1680 IPFEVPVPSR LHVTVEKREE IREWVLTVSM DQRVEQVLPK DERGTYEASL VAASTGIRSL 1690 1700 1710 1720 1730 1740 PCVITGYPVL RNKIEFKRPG MAANKDDWNK FLMATKTTHS PECQDVLKFI TQWCGGLPSA GYSFH

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Pooled EMBL AAI63767.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC163767 mRNA. Translation: AAI63767.1.
IPI	IPI00492368.
RefSeq	NP_001002312.1. NM_001002312.1.
UniGene	Dr.19771.
3D structure databases
ProteinModelPortal	B3DK94.
ModBase	Search...
Protein-protein interaction databases
STRING	B3DK94.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	432389.
KEGG	dre:432389.
Organism-specific databases
CTD	26160.
ZFIN	ZDB-GENE-040827-1. ift172.
Phylogenomic databases
HOVERGEN	HBG098449.
Gene expression databases
Bgee	B3DK94.
Family and domain databases
InterPro	IPR011044. Quino_amine_DH_bsu. IPR011990. TPR-like_helical. IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR011046. WD40_repeat-like_dom. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 3 hits. G3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
Pfam	PF00400. WD40. 2 hits. [Graphical view]
SMART	SM00320. WD40. 6 hits. [Graphical view]
SUPFAM	SSF50969. Amine_DH_B_like. 1 hit. SSF50978. WD40_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3DK94_DANRE

Accession

Primary (citable) accession number: B3DK94

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)