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B3DI55 (B3DI55_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein Wnt RuleBase RU003503
Gene names
Name:wnt1 EMBL AAI63003.1 ZFIN ZDB-GENE-980526-526
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI63003.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Ligand for members of the frizzled family of seven transmembrane receptors By similarity. RuleBase RU003500

Subcellular location

Secreted › extracellular space › extracellular matrix By similarity RuleBase RU003500.

Sequence similarities

Belongs to the Wnt family. RuleBase RU003500

Sequences

Sequence LengthMass (Da)Tools
B3DI55 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: F2AB0A82DB031D3E

FASTA37041,011
        10         20         30         40         50         60 
MRVLALLLAV KAACVLLVSS LTGTGAVNNS GRWWGIVNVA SSGNLLTNSK NVQLVLDPSL 

        70         80         90        100        110        120 
ALLSRRQRKL IRQNPGILHA IAAGLHTAIK ECKWQFRNRR WNCPTTHSPN VFGKIVNRGC 

       130        140        150        160        170        180 
RETAFVFAIT SAGVTHAVAR SCSEGAIESC TCDYRRRGPG GPDWHWGGCS DNVEFGRMFG 

       190        200        210        220        230        240 
REFVDSSERG RDLRYLTNLH NNEAGRMTVA SEMQQECKCH GMSGSCTVRT CWMRLPSFRL 

       250        260        270        280        290        300 
VGDYLKDRFD GASRVVYANK GSNRASHRAD PRHLEPENPA HKLPSSRDLV YFEKSPNFCS 

       310        320        330        340        350        360 
YNGKTGTHGT SGRTCNSSSP ALDGCELLCC GRGYKTRMEQ VTERCHCTFH WCCHVSCLNC 

       370 
TSTQTVHQCL

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Pooled EMBL AAI63003.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC163003 mRNA. Translation: AAI63003.1.
BC163014 mRNA. Translation: AAI63014.1.
IPIIPI00484391.
RefSeqNP_001188327.1. NM_001201398.1.
UniGeneDr.85371.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB3DI55.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID30128.
KEGGdre:30128.

Organism-specific databases

CTD7471.
ZFINZDB-GENE-980526-526. wnt1.

Phylogenomic databases

HOVERGENHBG001595.
OMAMWWGIAK.

Gene expression databases

BgeeB3DI55.

Family and domain databases

InterProIPR005817. Wnt.
IPR009139. Wnt1.
IPR018161. Wnt_grthfactor_CS.
[Graphical view]
PANTHERPTHR12027. Wnt. 1 hit.
PfamPF00110. wnt. 1 hit.
[Graphical view]
PRINTSPR01841. WNT1PROTEIN.
PR01349. WNTPROTEIN.
SMARTSM00097. WNT1. 1 hit.
[Graphical view]
PROSITEPS00246. WNT1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB3DI55_DANRE
AccessionPrimary (citable) accession number: B3DI55
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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