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Unreviewed, UniProtKB/TrEMBL B3DHD4 (B3DHD4_DANRE)

Last modified November 3, 2009. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Similar to UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4 EMBL AAI62724.1
Gene names
Name: LOC561084 EMBL AAI62724.1
ORF Names: zgc:194153 ZFIN ZDB-GENE-080723-30
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI62724.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

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Protein attributes

Sequence length609 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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Sequences

Sequence LengthMass (Da)Tools
B3DHD4-1 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: B4441324FF3BF561

FASTA60969,825
        10         20         30         40         50         60 
MACTRRTKTL VSTCVILSGM TNILCLLYVG WITNYVSNNG NVKVAGRTHE KKFDDDSKGE 

        70         80         90        100        110        120 
TLRIIERLDR LESVVNQHIQ EKPQSDIEDS ADLSLSETLF AHWGHELGPE SRKVALRKFQ 

       130        140        150        160        170        180 
YYGYNAYLSD RLSLDRAVPD LRPDGCRNIS YPTGLPQVSI IFIFVNEALS VILRSVHSVI 

       190        200        210        220        230        240 
QRTPAHLLKE IILVDDHSNN AELLENLQRF VDETNQQQRD FIKVVHHEKQ EGLIRSRVSG 

       250        260        270        280        290        300 
WRAASAPIVA LFDAHVEFSI GWAEPILHRI QEDRTRAISP SFDNIKYDTF EIEEYPLSAQ 

       310        320        330        340        350        360 
GFDWELWCRY LNPPKSWWMQ KNQTAPIRSP ALIGCFVVDR EYFEEIGLLD EGMEVYGGEN 

       370        380        390        400        410        420 
VELGIRVWLC GGSVEVIPCS RIAHIERAHK PYTEDLATHV RRNALRVAEV WMDEFKSHVY 

       430        440        450        460        470        480 
MAWNIPQQDS GIDIGDIRDR KALRERLRCK PFSWFLNNIY SEMRTYMDTI AYGVLRNSLR 

       490        500        510        520        530        540 
PDLCVDQGPD SDNIPILYIC HGLTPQNVYF TSSQQLHVGG LSPTIDDDDN KCLVDVNSRP 

       550        560        570        580        590        600 
RLLECSYASN KHMKLSWLFT QGGSIQNKKS KRCLELVESA DVDHGYQLVL QKCSSQKWTI 


THILPGKVL

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References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Pooled EMBL AAI62724.1.

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Cross-references

Sequence databases

BC162724 mRNA. Translation: AAI62724.1.
IPIIPI00489356.
RefSeqNP_001124120.1.
UniGeneDr.146503

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID100170813.
KEGGdre:100170813.

Organism-specific databases

ZFINZDB-GENE-080723-30. zgc:194153.

Family and domain databases

InterProIPR001173. Glyco_trans_2.
IPR008997. Ricin_B-rel_lectin.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamPF00535. Glycos_transf_2. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTSM00458. RICIN. 1 hit.
[Graphical view]
PROSITEPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameB3DHD4_DANRE
AccessionPrimary (citable) accession number: B3DHD4
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: November 3, 2009
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information