B3DG58 (B3DG58_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Protein Wnt RuleBase RU003503

Gene names

Name:

wnt10b Ensembl ENSDARP00000059973 EMBL AAI62282.1 ZFIN ZDB-GENE-980526-524

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI62282.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	Ligand for members of the frizzled family of seven transmembrane receptors By similarity. RuleBase RU003500
Subcellular location	Secreted › extracellular space › extracellular matrix By similarity RuleBase RU003500.
Sequence similarities	Belongs to the Wnt family. RuleBase RU003500

Ontologies

Keywords
Biological process	Wnt signaling pathway SAAS SAAS005817 RuleBase RU003500
Cellular component	Extracellular matrix SAAS SAAS005817 Secreted
Molecular function	Developmental protein SAAS SAAS005817 RuleBase RU003500
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	Wnt receptor signaling pathway Inferred from electronic annotation. Source: UniProtKB-KW multicellular organismal development Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	proteinaceous extracellular matrix Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	receptor binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3DG58 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 303170D5BB7E9A84	FASTA	427	47,437
	10 20 30 40 50 60 MELPHRQCLG RVLIVTAALL SPAFTVLGND ILGLKVAGEP VLTPNAVCLR LAGLTKKQMR 70 80 90 100 110 120 LCVRSPDVTA SALQGIQVAI HECQHQLRDQ RWNCSSLENH GKLPHQSAIL NRGFRESAFS 130 140 150 160 170 180 LSLLAAGVVH SVASACSLGK LRGCGCEAKR RLDDDKIRLK LTQLQLQTFQ RSGVSLAGAG 190 200 210 220 230 240 ENTPELSSLH GSLPANLHSS HPMSLLKPLP DEVTMLQDTW EWGGCSHDIR FGVRFSRDWL 250 260 270 280 290 300 DSRGSPRDIH ARMRIHNNRV GRQVVTDNMR RKCKCHGTSG SCQFKTCWYV SPEFRLVGSL 310 320 330 340 350 360 LREKFLTAIF INSQNKNNGV FNSRTGGSTG SDPLRGQRRR SISRELVYFE KSPDFCDREP 370 380 390 400 410 420 AVDSLGTQGR ICNKSSPGMD GCGSLCCGRG HNILKQARSE RCHCRFHWCC YVLCEECKVT EWVNVCK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Pooled EMBL AAI62282.1.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000059973.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000059973.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR352210 Genomic DNA. No translation available. BC162282 mRNA. Translation: AAI62282.1. BC162831 mRNA. Translation: AAI62831.1.
IPI	IPI00496927.
UniGene	Dr.88562.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3DG58.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000059974; ENSDARP00000059973; ENSDARG00000040925.
Organism-specific databases
ZFIN	ZDB-GENE-980526-524. wnt10b.
Phylogenomic databases
HOVERGEN	HBG001595.
OMA	GCGWKGS.
PhylomeDB	B3DG58.
Gene expression databases
Bgee	B3DG58.
Family and domain databases
InterPro	IPR005817. Wnt. IPR018161. Wnt_grthfactor_CS. [Graphical view]
PANTHER	PTHR12027. Wnt. 1 hit.
Pfam	PF00110. wnt. 1 hit. [Graphical view]
PRINTS	PR01349. WNTPROTEIN.
SMART	SM00097. WNT1. 1 hit. [Graphical view]
PROSITE	PS00246. WNT1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3DG58_DANRE

Accession

Primary (citable) accession number: B3DG58

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)