B3CUQ0 (B3CUQ0_ORITI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isocitrate dehydrogenase EMBL BAG41097.1

Gene names

Name:	icd EMBL BAG41097.1
Ordered Locus Names:	OTT_1639 EMBL BAG41097.1

Organism

Orientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi) [Complete proteome] [HAMAP] EMBL BAG41097.1

Taxonomic identifier

334380 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Orientia › Orientia tsutsugamushi

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glyoxylate cycle Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro isocitrate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: InterPro magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3CUQ0 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: DEBA2724BB059684	FASTA	519	58,017
	10 20 30 40 50 60 MKNVIPVTIA YGDGIGPEIM EAVVYVLKEA AVPLRLETIE IGEKLYNKYY TYGITEDTWS 70 80 90 100 110 120 QIFRTKALLK GPVTTPQGEG YKSLNVTLKK TLGLYANVRP SISYFPFVNT SAPEIDVVII 130 140 150 160 170 180 RENEEDLYTG IEYHHTADTY ESIKLISRSG SEKIIRFAFE YALKNNRKKI SCFSKDNIMK 190 200 210 220 230 240 FTDGIFHNTF NEIASQYSNI QVDHYLIDIG SARLISSPQK FDVIVTSNLY GDILSDIAAE 250 260 270 280 290 300 ISDSIGLAGS ANIGKDYAMF EAVHGSAPDI AGQNIANPSG LLNAAIMMLV HLGLTEHAAK 310 320 330 340 350 360 IENALKKTIE DGIHTADIYN PSISSKKVGT KEFAQAIINN LEYKPKKLKI AEYHNLDVES 370 380 390 400 410 420 NIINNSQIQT ITETRQQKKL VGVDVFFDSH NIIDYHRITK QLTKRIASLS SLHGMHLVTI 430 440 450 460 470 480 SAKGLKLWPN STVREMFSDH WCCRFMVQSS GKDKTVTAKN LTMKDILSLL NDLVATINNP 490 500 510 IHSESKDDNY DNSIKFELIK VENLYLFNDT VGFSLAQGE

References

[1]

"The whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution." Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., Oshima K., Tamura A., Hattori M., Hayashi T. DNA Res. 15:185-199(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ikeda.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008981 Genomic DNA. Translation: BAG41097.1.
RefSeq	YP_001938331.1. NC_010793.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	334380.OTT_1639.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAG41097; BAG41097; OTT_1639.
GeneID	6337851.
KEGG	ott:OTT_1639.
PATRIC	22829652. VBIOriTsu129072_1835.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0473.
HOGENOM	HOG000021113.
KO	K00031.
OMA	YANVVHV.
ProtClustDB	PRK09222.
Enzyme and pathway databases
BioCyc	OTSU334380:GC7O-1670-MONOMER.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR001804. Isocitrate/isopropylmalate_DH. IPR014273. Isocitrate_DH_aproteobac-typ. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 1 hit. [Graphical view]
TIGRFAMs	TIGR02924. ICDH_alpha. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3CUQ0_ORITI

Accession

Primary (citable) accession number: B3CUQ0

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	May 29, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)