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B3CUM6

- B3CUM6_ORITI

UniProt

B3CUM6 - B3CUM6_ORITI

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Protein
Submitted name:

2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase

Gene

dapD

Organism
Orientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity Source: InterPro

GO - Biological processi

  1. lysine biosynthetic process via diaminopimelate Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciOTSU334380:GC7O-1645-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferaseImported
Gene namesi
Name:dapDImported
Ordered Locus Names:OTT_1615Imported
OrganismiOrientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi)Imported
Taxonomic identifieri334380 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeOrientia
ProteomesiUP000001033: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi334380.OTT_1615.

Structurei

3D structure databases

ProteinModelPortaliB3CUM6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2171.
HOGENOMiHOG000003295.
KOiK00674.
OMAiYIARNTV.
OrthoDBiEOG68H8BV.

Family and domain databases

Gene3Di1.10.166.10. 1 hit.
InterProiIPR005664. DapD_Trfase_Hexpep_rpt_fam.
IPR001451. Hexapep_transf.
IPR023180. THP_succinylTrfase_dom1.
IPR011004. Trimer_LpxA-like.
[Graphical view]
PANTHERiPTHR19136:SF52. PTHR19136:SF52. 1 hit.
PfamiPF00132. Hexapep. 1 hit.
PF14805. THDPS_N_2. 1 hit.
[Graphical view]
SUPFAMiSSF51161. SSF51161. 1 hit.
TIGRFAMsiTIGR00965. dapD. 1 hit.

Sequencei

Sequence statusi: Complete.

B3CUM6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFKGFLKYRV NIMEKNTGKL YKYINKVEDF WTKRNQLIKG AEDYKVACRW
60 70 80 90 100
LQSILDDLDK GIVRACEKKH GEWHTNEWVK KAILLYFKLH DSVLTSTQVA
110 120 130 140 150
CYYDKIPLKF YSSGSEEDNF KELGIRVVPG AIIRKGAYIG HSTVIMPSFI
160 170 180 190 200
NIGAYVGSGT MIDSWATVGS CAYVGNKCHI SGGVGLGGVL EPIQNASVIV
210 220 230 240 250
EDNCFIGARS QIAEGVIVES GAVIGTGVQI SASTKIVDRE TGEVTYGRIP
260 270 280 290
ANSVVVPGSL PQPYSNNIQL QCAVIIKKVD NNTRAKTSIN DLLRC
Length:295
Mass (Da):32,481
Last modified:July 22, 2008 - v1
Checksum:i3A230B00AC2CD389
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008981 Genomic DNA. Translation: BAG41073.1.
RefSeqiYP_001938307.1. NC_010793.1.

Genome annotation databases

EnsemblBacteriaiBAG41073; BAG41073; OTT_1615.
GeneIDi6337403.
KEGGiott:OTT_1615.
PATRICi22829592. VBIOriTsu129072_1806.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008981 Genomic DNA. Translation: BAG41073.1 .
RefSeqi YP_001938307.1. NC_010793.1.

3D structure databases

ProteinModelPortali B3CUM6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 334380.OTT_1615.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAG41073 ; BAG41073 ; OTT_1615 .
GeneIDi 6337403.
KEGGi ott:OTT_1615.
PATRICi 22829592. VBIOriTsu129072_1806.

Phylogenomic databases

eggNOGi COG2171.
HOGENOMi HOG000003295.
KOi K00674.
OMAi YIARNTV.
OrthoDBi EOG68H8BV.

Enzyme and pathway databases

BioCyci OTSU334380:GC7O-1645-MONOMER.

Family and domain databases

Gene3Di 1.10.166.10. 1 hit.
InterProi IPR005664. DapD_Trfase_Hexpep_rpt_fam.
IPR001451. Hexapep_transf.
IPR023180. THP_succinylTrfase_dom1.
IPR011004. Trimer_LpxA-like.
[Graphical view ]
PANTHERi PTHR19136:SF52. PTHR19136:SF52. 1 hit.
Pfami PF00132. Hexapep. 1 hit.
PF14805. THDPS_N_2. 1 hit.
[Graphical view ]
SUPFAMi SSF51161. SSF51161. 1 hit.
TIGRFAMsi TIGR00965. dapD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution."
    Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., Oshima K., Tamura A., Hattori M., Hayashi T.
    DNA Res. 15:185-199(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: IkedaImported.

Entry informationi

Entry nameiB3CUM6_ORITI
AccessioniPrimary (citable) accession number: B3CUM6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: October 1, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3