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B3CUM6 (B3CUM6_ORITI) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:dapD EMBL BAG41073.1
Ordered Locus Names:OTT_1615 EMBL BAG41073.1
OrganismOrientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi) [Complete proteome] [HAMAP] EMBL BAG41073.1
Taxonomic identifier334380 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeOrientia

Protein attributes

Sequence length295 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B3CUM6 [UniParc].

Last modified July 22, 2008. Version 1.
Checksum: 3A230B00AC2CD389

FASTA29532,481
        10         20         30         40         50         60 
MFKGFLKYRV NIMEKNTGKL YKYINKVEDF WTKRNQLIKG AEDYKVACRW LQSILDDLDK 

        70         80         90        100        110        120 
GIVRACEKKH GEWHTNEWVK KAILLYFKLH DSVLTSTQVA CYYDKIPLKF YSSGSEEDNF 

       130        140        150        160        170        180 
KELGIRVVPG AIIRKGAYIG HSTVIMPSFI NIGAYVGSGT MIDSWATVGS CAYVGNKCHI 

       190        200        210        220        230        240 
SGGVGLGGVL EPIQNASVIV EDNCFIGARS QIAEGVIVES GAVIGTGVQI SASTKIVDRE 

       250        260        270        280        290 
TGEVTYGRIP ANSVVVPGSL PQPYSNNIQL QCAVIIKKVD NNTRAKTSIN DLLRC 

« Hide

References

[1]"The whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution."
Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., Oshima K., Tamura A., Hattori M., Hayashi T.
DNA Res. 15:185-199(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ikeda.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008981 Genomic DNA. Translation: BAG41073.1.
RefSeqYP_001938307.1. NC_010793.1.

3D structure databases

ProteinModelPortalB3CUM6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING334380.OTT_1615.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAG41073; BAG41073; OTT_1615.
GeneID6337403.
KEGGott:OTT_1615.
PATRIC22829592. VBIOriTsu129072_1806.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2171.
HOGENOMHOG000003295.
KOK00674.
OMAWVTVGSC.
OrthoDBEOG68H8BV.
ProtClustDBCLSK2325603.

Enzyme and pathway databases

BioCycOTSU334380:GC7O-1645-MONOMER.

Family and domain databases

Gene3D1.10.166.10. 1 hit.
InterProIPR005664. DapD_Trfase_Hexpep_rpt_fam.
IPR001451. Hexapep_transf.
IPR023180. THP_succinylTrfase_dom1.
IPR011004. Trimer_LpxA-like.
[Graphical view]
PANTHERPTHR19136:SF52. PTHR19136:SF52. 1 hit.
PfamPF00132. Hexapep. 1 hit.
[Graphical view]
SUPFAMSSF51161. SSF51161. 1 hit.
TIGRFAMsTIGR00965. dapD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB3CUM6_ORITI
AccessionPrimary (citable) accession number: B3CUM6
Entry history
Integrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: November 13, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)