B3CUM6 (B3CUM6_ORITI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase EMBL BAG41073.1

Gene names

Name:	dapD EMBL BAG41073.1
Ordered Locus Names:	OTT_1615

Organism

Orientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi) [Complete proteome] [HAMAP] EMBL BAG41073.1

Taxonomic identifier

334380 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Orientia › Orientia tsutsugamushi

Protein attributes

Sequence length	295 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL BAG41073.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: InterPro
Molecular_function	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3CUM6 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 3A230B00AC2CD389	FASTA	295	32,481
	10 20 30 40 50 60 MFKGFLKYRV NIMEKNTGKL YKYINKVEDF WTKRNQLIKG AEDYKVACRW LQSILDDLDK 70 80 90 100 110 120 GIVRACEKKH GEWHTNEWVK KAILLYFKLH DSVLTSTQVA CYYDKIPLKF YSSGSEEDNF 130 140 150 160 170 180 KELGIRVVPG AIIRKGAYIG HSTVIMPSFI NIGAYVGSGT MIDSWATVGS CAYVGNKCHI 190 200 210 220 230 240 SGGVGLGGVL EPIQNASVIV EDNCFIGARS QIAEGVIVES GAVIGTGVQI SASTKIVDRE 250 260 270 280 290 TGEVTYGRIP ANSVVVPGSL PQPYSNNIQL QCAVIIKKVD NNTRAKTSIN DLLRC

References

[1]

"The whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution." Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., Oshima K., Tamura A., Hattori M., Hayashi T. DNA Res. 15:185-199(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ikeda.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008981 Genomic DNA. Translation: BAG41073.1.
RefSeq	YP_001938307.1. NC_010793.1.
3D structure databases
ProteinModelPortal	B3CUM6.
ModBase	Search...
Protein-protein interaction databases
STRING	334380.OTT_1615.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAG41073; BAG41073; OTT_1615.
GeneID	6337403.
KEGG	ott:OTT_1615.
PATRIC	22829592. VBIOriTsu129072_1806.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2171.
HOGENOM	HOG000003295.
KO	K00674.
OMA	IMPSFIN.
ProtClustDB	CLSK2325603.
Family and domain databases
Gene3D	1.10.166.10. 1 hit.
InterPro	IPR005664. DapD_Trfase_Hexpep_rpt_fam. IPR001451. Hexapep_transf. IPR023180. THP_succinylTrfase_dom1. IPR011004. Trimer_LpxA-like. [Graphical view]
PANTHER	PTHR19136:SF52. PTHR19136:SF52. 1 hit.
Pfam	PF00132. Hexapep. 2 hits. [Graphical view]
SUPFAM	SSF51161. Trimer_LpxA_like. 1 hit.
TIGRFAMs	TIGR00965. dapD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3CUM6_ORITI

Accession

Primary (citable) accession number: B3CUM6

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)