B3CRX4 (B3CRX4_ORITI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type IV secretion system protein VirB6 EMBL BAG40231.1

Gene names

Name:	virB6 EMBL BAG40231.1
Ordered Locus Names:	OTT_0773

Organism

Orientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi) [Complete proteome] [HAMAP]

Taxonomic identifier

334380 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Orientia

Protein attributes

Sequence length	1090 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein secretion by the type IV secretion system Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B3CRX4 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 624BCD7E3D28B741	FASTA	1,090	122,278
	10 20 30 40 50 60 MQSKIIKFAI IAVCIAVVSF ILMLFGALRS GDDCWYRYNT DGQDLDVIRL TQNVRASGQY 70 80 90 100 110 120 DSFRLGGIVD PGKPCGLWVK SDFYVSVPEE NGQLKPVNID FLIDGTVSLC QAYLPKNALT 130 140 150 160 170 180 CKLKYNDGNE CNISDINKFF NGEKSDCIED CEDNTDDSGN LIPIPRILDP GDGLPVILKA 190 200 210 220 230 240 NVGEWRNLAQ VSAGDEIEVK IGRNQNFSHG GVENTEIGYA YSRPEFDWFN DTSLDWQKGT 250 260 270 280 290 300 NDTFGIIKRT KQVRADCQEG KKNYSPLCGR YSPWGEGDNY IKQCDECKGC TCEDCGMKPK 310 320 330 340 350 360 CSGSKPVCPA PECEMAGAHG WASKAFWVFN TDLGKDKCFY KGTVRDFWGG KACPEKYLLD 370 380 390 400 410 420 CKRGVLADGL PEEYRDDGTR TVPATLTEQD RNDIKSLGRI ACSNRLDEQL VKNRQKVYSW 430 440 450 460 470 480 RSATYATDLK YRFSSAQNKD SVLGNKCKSD FPSGKDLATG CYGITKVNQD LIIYKDQISE 490 500 510 520 530 540 TLFSGPRYLQ YMIRPDINIE SMKNSVGGYV LYLKQNSCVR KSGVAFDDSK FHGRGKILYA 550 560 570 580 590 600 IVPAGVDVNK LKSHELDVYT TGSLDVKVED LVGKAKISSS QSGYIWFKIL NDEKDYRASV 610 620 630 640 650 660 GEYKITMSTI VPRGKFISKV LNPIIRIFEN KIANASKTMF KNMTCYQQND KSRCTNFFNY 670 680 690 700 710 720 IRAMLTLYIM GCGFAFMLGA VNFTAKELVI RIVKVIIVSG LINEGTFNFF NAYLYDLIMN 730 740 750 760 770 780 FSKQLMVNVS GYEYDQNIGV FLFLDELMSK IFFNKTFYVQ LLSLLSMGLM GVVYYIIIFV 790 800 810 820 830 840 PIILIIISLL KTIMVYLVST TAVALLVGLA PLFLSFMLFN RTWYLFDNWV RMLFRYLIEP 850 860 870 880 890 900 VILMAGITIL TQLFIVYLDF VLGYSVCWKC AIVFKLPKID ALGGILGSYG GQELFCINWF 910 920 930 940 950 960 GPWGYDNRAD NNIGLAMNYI IALVIIAYCM YSYIDFSSLM VDILTAGGAG GIAPSAGHIA 970 980 990 1000 1010 1020 PQVWDTAVQW TEKAVMKVAS IGKKGSFAVR KGIGKGISHA KSKYSSSQTE KSKDKDNVVN 1030 1040 1050 1060 1070 1080 RRTNLENKSL NDKGGSAIKR NSNVENVKPN QNTSLRVNNQ EIDLNSQKPS HNESSVRRHD 1090 LNKKNFENND

References

[1]

"The whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution." Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., Oshima K., Tamura A., Hattori M., Hayashi T. DNA Res. 15:185-199(2008) [PubMed: 18508905] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008981 Genomic DNA. Translation: BAG40231.1.
RefSeq	YP_001937465.1. NC_010793.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3CRX4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6338174.
GenomeReviews	Gene locus OTT_0773 in contig AP008981_GR.
KEGG	ott:OTT_0773.
PATRIC	22827690. VBIOriTsu129072_0875.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG586502.
OMA	YLDFVLG.
ProtClustDB	CLSK870746.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
KO	K03201.
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B3CRX4_ORITI

Accession

Primary (citable) accession number: B3CRX4

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)