B3CQD6 (B3CQD6_ORITI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Cytochrome c oxidase assembly protein CtaG HAMAP MF_00155

Gene names

Name:	cox11 EMBL BAG39475.1
Synonyms:	ctaG HAMAP MF_00155
Ordered Locus Names:	OTT_0017

Organism

Orientia tsutsugamushi (strain Ikeda) (Rickettsia tsutsugamushi) [Complete proteome] [HAMAP]

Taxonomic identifier

334380 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Orientia

Protein attributes

Sequence length	175 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I By similarity. HAMAP MF_00155
Subcellular location	Cell inner membrane; Single-pass type II membrane protein; Periplasmic side By similarity HAMAP MF_00155.
Sequence similarities	Belongs to the COX11/CtaG family. HAMAP MF_00155

Ontologies

Keywords
Cellular component	Cell inner membrane HAMAP MF_00155 Cell membrane Membrane
Domain	Signal-anchor HAMAP MF_00155 Transmembrane Transmembrane helix HAMAP MF_00155
Ligand	Copper HAMAP MF_00155
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	respiratory chain complex IV assembly Inferred from electronic annotation. Source: HAMAP
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	copper ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Topological domain	1 – 3	3	Cytoplasmic By similarity HAMAP MF_00155
	Transmembrane	4 – 26	23	Helical; Signal-anchor for type II membrane protein; By similarity HAMAP MF_00155
	Topological domain	27 – 175	149	Periplasmic By similarity HAMAP MF_00155

Sequences

	Sequence		Length	Mass (Da)
	B3CQD6 [UniParc]. Last modified July 22, 2008. Version 1. Checksum: 233772AE5A6F09C8	FASTA	175	20,176
	10 20 30 40 50 60 MKAKNNEIIF TLISLIVSML ILSFASVPIY SLFCKVTGFG GTVRQQIASS KKKGKKQITI 70 80 90 100 110 120 NFDANIEQNL QWQFIPKQKS ITVTTGENNL VFYYSRNLTN RDIVGTAIYN VTPNKAGKYF 130 140 150 160 170 VKIYCFCFEE QLLKKQEEIL MPVSFYIDPA IEDDPYMNDV NTITLSYTFF KIREQ

References

[1]

"The whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution." Nakayama K., Yamashita A., Kurokawa K., Morimoto T., Ogawa M., Fukuhara M., Urakami H., Ohnishi M., Uchiyama I., Ogura Y., Ooka T., Oshima K., Tamura A., Hattori M., Hayashi T. DNA Res. 15:185-199(2008) [PubMed: 18508905] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008981 Genomic DNA. Translation: BAG39475.1.
RefSeq	YP_001936709.1. NC_010793.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B3CQD6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6338045.
GenomeReviews	Gene locus OTT_0017 in contig AP008981_GR.
KEGG	ott:OTT_0017.
PATRIC	22825960. VBIOriTsu129072_0019.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG525908.
OMA	KLIFYRA.
ProtClustDB	PRK05089.
Family and domain databases
HAMAP	MF_00155. CtaG. [Tree]
InterPro	IPR023471. CtaG/Cox11_dom. IPR007533. Cyt_c_oxidase_assmbl_CtaG. [Graphical view]
Gene3D	G3DSA:2.60.370.10. CtaG_Cox11. 1 hit.
KO	K02258.
PANTHER	PTHR21320. CtaG_Cox11. 1 hit.
Pfam	PF04442. CtaG_Cox11. 1 hit. [Graphical view]
PIRSF	PIRSF005413. COX11. 1 hit.
SUPFAM	SSF110111. CtaG_Cox11. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B3CQD6_ORITI

Accession

Primary (citable) accession number: B3CQD6

Entry history

Integrated into UniProtKB/TrEMBL:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)