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Reviewed, UniProtKB/Swiss-Prot B2VDM3 (NAGZ_ERWT9)

Last modified January 19, 2010. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Beta-hexosaminidase
    EC=3.2.1.52
Alternative name(s):
    N-acetyl-beta-glucosaminidase
    Beta-N-acetylhexosaminidase
Gene names
Name: nagZ
Ordered Locus Names: ETA_20090
OrganismErwinia tasmaniensis (strain DSM 17950 / Et1/99) [Complete proteome] [HAMAP]
Taxonomic identifier338565 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeErwinia

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides By similarity. HAMAP MF_00364

Catalytic activity

Hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. HAMAP MF_00364

Pathway

Cell wall biogenesis; peptidoglycan recycling. HAMAP MF_00364

Subcellular location

Cytoplasm By similarity HAMAP MF_00364.

Sequence similarities

Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 343343Beta-hexosaminidase HAMAP MF_00364
PRO_1000121061

Sites

Active site2481 By similarity

Sequences

Sequence LengthMass (Da)Tools
B2VDM3-1 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: C04A9677E8D6563F

FASTA34337,958
        10         20         30         40         50         60 
MGPVMLDVLG CELDAEEREI LQHPLTGGLI LFSRNYHDPA QLRELVRQIR AASRHRLVVA 

        70         80         90        100        110        120 
VDQEGGRVQR FREGFTRLPA MQAFSALNPS AEAETLAQQA GWLMASEMIA MDIDISFAPV 

       130        140        150        160        170        180 
LDIGYGSAAI GERSFHEDPA IALQMARCFI RGMREAGMKT TGKHFPGHGA VSADSHKETP 

       190        200        210        220        230        240 
RDTRSEAEIR RHDMPIFQQL IAERALDAIM PAHVIYTEVD PRPASGSSHW LKTVLRQELG 

       250        260        270        280        290        300 
FDGVIFSDDL SMEGAAIMGS YAERGQAALD AGCDMILVCN NREGAVSVLD NLPAMEADRV 

       310        320        330        340 
ARLYHRGDFT RQQLIDSSRW KETSVALDRL QGRWLNHKAA AGR 

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References

[1]"The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic bacterium in the genus Erwinia."
Kube M., Migdoll A.M., Mueller I., Kuhl H., Beck A., Reinhardt R., Geider K.
Environ. Microbiol. 10:2211-2222(2008) [PubMed: 18462403] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU468135 Genomic DNA. Translation: CAO97055.1.
RefSeqYP_001907938.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID6299458.
GenomeReviewsGene locus ETA_20090 in contig CU468135_GR.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG617255.
OMAVERSIRM.

Family and domain databases

HAMAPMF_00364. NagZ.
[Tree]
InterProIPR019800. Glyco_hydro_3_AS.
IPR001764. Glyco_hydro_3_N.
IPR017853. Glyco_hydro_catalytic_core.
[Graphical view]
Gene3DG3DSA:3.20.20.300. Glyco_hydro_3_N. 1 hit.
PfamPF00933. Glyco_hydro_3. 1 hit.
[Graphical view]
PROSITEPS00775. GLYCOSYL_HYDROL_F3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameNAGZ_ERWT9
AccessionPrimary (citable) accession number: B2VDM3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 1, 2008
Last modified: January 19, 2010
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents