B2V7K4 (B2V7K4_SULSY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S17 HAMAP MF_01345 RuleBase RU003873

Gene names

Name:	rpsQ HAMAP MF_01345
Ordered Locus Names:	SYO3AOP1_0282

Organism

Sulfurihydrogenibium sp. (strain YO3AOP1) [Complete proteome] [HAMAP]

Taxonomic identifier

436114 [NCBI]

Taxonomic lineage

Bacteria › Aquificae › Aquificales › Hydrogenothermaceae › Sulfurihydrogenibium

Protein attributes

Sequence length	90 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal By similarity. RuleBase RU003873 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP MF_01345
Subunit structure	Part of the 30S ribosomal subunit By similarity. HAMAP MF_01345
Sequence similarities	Belongs to the ribosomal protein S17P family. HAMAP MF_01345 RuleBase RU003872

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01345 RuleBase RU003873
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01345 RuleBase RU003872 EMBL ACD65927.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2V7K4 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 276C6805628D104E	FASTA	90	10,484
	10 20 30 40 50 60 MTVGNETKKR VKEFVGKVVS NKMDKTVVVA VERKFPHPLY GKQVKKTKKF YAHDEENKCN 70 80 90 EGDIVRIRES RPLSKLKRWV VVEIIQSAKK

References

[1]

"Complete and draft genome sequences of six members of the Aquificales." Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A. J. Bacteriol. 191:1992-1993(2009) [PubMed: 19136599] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001080 Genomic DNA. Translation: ACD65927.1.
RefSeq	YP_001930481.1. NC_010730.1.
3D structure databases
ProteinModelPortal	B2V7K4.
ModBase	Search...
Protein-protein interaction databases
STRING	B2V7K4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6332725.
GenomeReviews	Gene locus SYO3AOP1_0282 in contig CP001080_GR.
KEGG	sul:SYO3AOP1_0282.
PATRIC	23765259. VBISulSp94719_0294.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG750455.
OMA	TIRECRP.
ProtClustDB	CLSK2479373.
Family and domain databases
HAMAP	MF_01345_B. Ribosomal_S17_B. [Tree]
InterPro	IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR000266. Ribosomal_S17. IPR019984. Ribosomal_S17_bac-type. IPR019979. Ribosomal_S17_CS. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K02961.
PANTHER	PTHR10744. Ribosomal_S17. 1 hit.
Pfam	PF00366. Ribosomal_S17. 1 hit. [Graphical view]
PRINTS	PR00973. RIBOSOMALS17.
ProDom	PD001295. Ribosomal_S17. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR03635. S17_bact. 1 hit.
PROSITE	PS00056. RIBOSOMAL_S17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2V7K4_SULSY

Accession

Primary (citable) accession number: B2V7K4

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)