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B2V3W3 (Y1126_CLOBA) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0297 protein CLH_1126
Gene names
Ordered Locus Names:CLH_1126
OrganismClostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP]
Taxonomic identifier508767 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length85 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0297 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 8585UPF0297 protein CLH_1126 HAMAP-Rule MF_01507
PRO_1000198231

Sequences

Sequence LengthMass (Da)Tools
B2V3W3 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 2C3913334395EE87

FASTA859,823
        10         20         30         40         50         60 
MSKNIEHTMQ FDLNKTKEAL TKAILTEVYD SLQQKGYNPI NQLVGYLISG DPTYITNYNG 

        70         80 
ARALVRKLER DEILEEVIKS YLEIK

« Hide

References

[1]"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43."
Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Alaska E43 / Type E3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001078 Genomic DNA. Translation: ACD51662.1.
RefSeqYP_001920520.1. NC_010723.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING508767.CLH_1126.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD51662; ACD51662; CLH_1126.
GeneID6320515.
KEGGcbt:CLH_1126.
PATRIC19418516. VBICloBot115804_1055.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4472.
HOGENOMHOG000040383.
OMAKRHERDE.
ProtClustDBPRK05473.

Enzyme and pathway databases

BioCycCBOT508767:GHKO-709-MONOMER.

Family and domain databases

HAMAPMF_01507. UPF0297.
InterProIPR009309. UPF0297.
[Graphical view]
PfamPF06135. DUF965. 1 hit.
[Graphical view]
PIRSFPIRSF037258. DUF965_bac. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY1126_CLOBA
AccessionPrimary (citable) accession number: B2V3W3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 1, 2008
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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