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B2V346 (B2V346_CLOBA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative GTP diphosphokinase/guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase EMBL ACD51953.1
EC=2.7.6.5 EMBL ACD51953.1
EC=3.1.7.2 EMBL ACD51953.1
Gene names
Ordered Locus Names:CLH_0965
OrganismClostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP] EMBL ACD51953.1
Taxonomic identifier508767 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length728 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance By similarity. RuleBase RU003847

Sequence similarities

Belongs to the relA/spoT family. RuleBase RU003847

Sequences

Sequence LengthMass (Da)Tools
B2V346 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 8569E32CE26FE64B

FASTA72883,217
        10         20         30         40         50         60 
MIDNLLKKIH TNCHNVDVEM IKKAYYFAED AHKEQKRESG EPYIIHPIDV AEILAELGMD 

        70         80         90        100        110        120 
TSTIAAGLLH DVIEDTTCSY ESMKTIFNEE IANLVNGVTK LGKIQYKTKE EQQADNVRKM 

       130        140        150        160        170        180 
LLAMAKDIRV IIIKLADRLH NMRTLKFMPK GKQKLKAKET LDIYAPLAHR LGMSKIKWEL 

       190        200        210        220        230        240 
EDLSFRYLHE DEYYQLVEQI AEKRVERETY INEVVCYLKE KLDESGIDSD IEGRPKHFYS 

       250        260        270        280        290        300 
IYKKMINKNK SIEQIFDLTA IRILVNSVKD CYGVLGIVHT IYKPIPGRFK DYIAMPKPNM 

       310        320        330        340        350        360 
YQSLHTTVIG NQGKTFEIQI RTFEMHKTAE YGIAAHWKYK EGDKNEEDKA KDFEKKLVWL 

       370        380        390        400        410        420 
RDMLEWQKET SDAEEFIEGF KIDLFSDEVF VFTPKGVVIN LCAKATPIDF AYRIHTDIGN 

       430        440        450        460        470        480 
KCVGAKVNGR IVPLDYTLKT GEIVEILTSS NSKGPNMDWL NIAKSNQSKS KIKQWFKKAK 

       490        500        510        520        530        540 
KEENILKGKD LLEKELKKQG VNFVDIAKGE SYDRLIKRYN IHYTEDLHVL IGVGGISPSS 

       550        560        570        580        590        600 
FVSRLKEENE PHKEKDNQDI LNKAIEEHIS KTERKKSVDS YGITVKGESN LMVRFAKCCN 

       610        620        630        640        650        660 
PVPGDEILGY ITKGRGVSVH RTDCSNLKNL IQTDADKVVD VAWGIAKGTA YFAEIQVKSD 

       670        680        690        700        710        720 
DKMGILSDIM SVITDLKLNL SALNANPAKD GIAFINIKIK ITSIDELKNL MKKIKGIKGI 


LDVYRMNS

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References

[1]"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43."
Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Alaska E43 / Type E3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001078 Genomic DNA. Translation: ACD51953.1.
RefSeqYP_001920360.1. NC_010723.1.

3D structure databases

ProteinModelPortalB2V346.
ModBaseSearch...

Protein-protein interaction databases

STRING508767.CLH_0965.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD51953; ACD51953; CLH_0965.
GeneID6320034.
KEGGcbt:CLH_0965.
PATRIC19418190. VBICloBot115804_0893.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0317.
HOGENOMHOG000018299.
KOK00951.
OMALSWFREI.
ProtClustDBCLSK883100.

Enzyme and pathway databases

BioCycCBOT508767:GHKO-1002-MONOMER.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR026020. (p)ppGpp_Synthase.
IPR012675. Beta-grasp_dom.
IPR003607. HD/PDEase_dom.
IPR004811. RelA/Spo_fam.
IPR007685. RelA_SpoT.
IPR004095. TGS.
IPR012676. TGS-like.
[Graphical view]
PANTHERPTHR21262. PTHR21262. 1 hit.
PfamPF04607. RelA_SpoT. 1 hit.
PF02824. TGS. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
SM00954. RelA_SpoT. 1 hit.
[Graphical view]
SUPFAMSSF81271. TGS-like. 1 hit.
TIGRFAMsTIGR00691. spoT_relA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2V346_CLOBA
AccessionPrimary (citable) accession number: B2V346
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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