B2V1D6 (B2V1D6_CLOBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
[Ni/Fe] hydrogenase, large subunit EMBL ACD53897.1

Gene names

Name:	hupL EMBL ACD53897.1
Ordered Locus Names:	CLH_1596

Organism

Clostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP]

Taxonomic identifier

508767 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. RuleBase RU003896

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU003896 Nickel RuleBase RU003896
Molecular function	Oxidoreductase RuleBase RU003896
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ferredoxin hydrogenase activity Inferred from electronic annotation. Source: InterPro nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2V1D6 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 73A371D37C6D48DB	FASTA	471	52,442
	10 20 30 40 50 60 MAKIVIDPVT RISGLLKIEV DVENNKIVDA KSTGSQFRGF EKMFQGRPPL DIIRLAPRIC 70 80 90 100 110 120 GICSTSHAIA ATLALENALN ITPDFNGKVI RDIAHGFEFL QNHLRTTYFF AFPDFVKITA 130 140 150 160 170 180 SNPLYKDGTD KELDYRLPTD ITKKINEDYL EAIKYSRECH RAIAVLAGKA PHCHGIWVGG 190 200 210 220 230 240 ISTYIDVPEK EAVKYTITVV KEFIENKLLE DVKIIAQYYN DYFNMGKGYG NLMDFGLYSD 250 260 270 280 290 300 YKAPIKYTEA SAMINGKKEN IDVNNITENV KYSYLDIPGG MVMPGVSSTP EANPYKQDAY 310 320 330 340 350 360 SWVDAARYKN YSMEGGPLAR QILNGYYENK ISAMDRILAR VLESVKICES IIGLIDLMKL 370 380 390 400 410 420 GQAVQEEWKI PSKANGIGLT GAPRGALGHW LSIENKQVSN YTLIPPSAWN LSPTDSNNIK 430 440 450 460 470 GPVEAALIGT EINDMKNPVE IGRIVRSFDP CSNCAAHVTS DRYDPIVINI V

References

[1]	"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43." Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001078 Genomic DNA. Translation: ACD53897.1.
RefSeq	YP_001920984.1. NC_010723.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B2V1D6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6319510.
GenomeReviews	Gene locus CLH_1596 in contig CP001078_GR.
KEGG	cbt:CLH_1596.
PATRIC	19419456. VBICloBot115804_1521.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG733231.
OMA	HIARAYE.
ProtClustDB	CLSK2479169.
Family and domain databases
InterPro	IPR001501. Ni-dep_hyd_lsu. IPR018194. Ni-dep_hyd_lsu_Ni_BS. [Graphical view]
KO	K06281.
Pfam	PF00374. NiFeSe_Hases. 3 hits. [Graphical view]
PROSITE	PS00507. NI_HGENASE_L_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B2V1D6_CLOBA

Accession

Primary (citable) accession number: B2V1D6

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)