B2V0I6 (B2V0I6_CLOBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ACD53922.1
EC=5.1.1.1 EMBL ACD53922.1

Gene names

Ordered Locus Names:

CLH_1486

Organism

Clostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP] EMBL ACD53922.1

Taxonomic identifier

508767 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium botulinum › Clostridium botulinum E

Protein attributes

Sequence length	386 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ACD53922.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B2V0I6 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 1A9E6748490BE836	FASTA	386	43,313
	10 20 30 40 50 60 MEKIMRPVWA EIDLDAIAYN MKNIKKLAQN KDVIAVVKAD CYGHGALDVV PTLLENGASR 70 80 90 100 110 120 LAVAVLTEAI ELRNNNVNAP IMILGYTPEY LFEEVVNYDI EQTVYDLEYA KKLSHLAIKF 130 140 150 160 170 180 NKKAKIHIAI DTGMGRIGFI PNEKAIKDIK EIYDLKGIDV IGIFTHFSTS DETDKEYTNE 190 200 210 220 230 240 QFNKFTSFID MLSKVGVKIP IKHISNSGAI IDLPKTYLDS VRAGIILYGY YPSDEINKDN 250 260 270 280 290 300 IKLKPALTLK ASLTRVQELD INSYISYGKT FKTERKSIIA TLPIGYADGY SRLLAPGAKV 310 320 330 340 350 360 IINGQFAPIV GRICMDQCMI DVTDIDNVNV GDEVIILGED DNLKLTANDL ANSMGTINYE 370 380 ILCMLKYRIP RVYIKNGEIF NVRNYL

References

[1]

"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43." Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Alaska E43 / Type E3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001078 Genomic DNA. Translation: ACD53922.1.
RefSeq	YP_001920878.1. NC_010723.1.
3D structure databases
ProteinModelPortal	B2V0I6.
ModBase	Search...
Protein-protein interaction databases
STRING	508767.CLH_1486.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD53922; ACD53922; CLH_1486.
GeneID	6318202.
KEGG	cbt:CLH_1486.
PATRIC	19419238. VBICloBot115804_1416.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	NFKSIEI.
ProtClustDB	PRK00053.
Enzyme and pathway databases
BioCyc	CBOT508767:GHKO-2974-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2V0I6_CLOBA

Accession

Primary (citable) accession number: B2V0I6

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)