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B2V0F0 (SELD_CLOBA) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:CLH_0607
OrganismClostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP]
Taxonomic identifier508767 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length345 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 345345Selenide, water dikinase HAMAP MF_00625
PRO_1000147244

Regions

Nucleotide binding227 – 2337ATP Potential

Sites

Active site161 Potential
Site191Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
B2V0F0 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: DD22CDF987394476

FASTA34537,030
        10         20         30         40         50         60 
MSKNIKLTSL TKNSGCAAKI GPGVLHSVLS SLPKFEDENL IVGFDTSDDA CVYKINDDTV 

        70         80         90        100        110        120 
VIKTVDFFPP MVDDPYTFGQ VAAANALSDV YAMGGNPSIA MNLICFPSCL DISIMREILA 

       130        140        150        160        170        180 
GGYDKVKEAG AVIAGGHTIA DPTPKYGLCV SGFARPEEIL SNSNAKIGDV IILTKPLGIG 

       190        200        210        220        230        240 
IMNTAAKAEL IGENKIKEVT SIMSTLNKYA KECTSGLEIH SCTDVTGFGL IGHGYEMASG 

       250        260        270        280        290        300 
SKKTIEIFSE YVPIIDGALD YAKMGIIPEG MYNNLDYLKD KFVVEANISQ ELQDVLIDPQ 

       310        320        330        340 
TSGGLLLSLP EKHAKEFLSR IEKFTPYAKI IGQVLDKGDK PIVIK

« Hide

References

[1]"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43."
Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Alaska E43 / Type E3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001078 Genomic DNA. Translation: ACD53367.1.
RefSeqYP_001920005.1. NC_010723.1.

3D structure databases

ProteinModelPortalB2V0F0.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2V0F0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6318782.
GenomeReviewsGene locus CLH_0607 in contig CP001078_GR.
KEGGcbt:CLH_0607.
PATRIC19417478. VBICloBot115804_0537.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMAAGXAAKL.
ProtClustDBCLSK2338321.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_CLOBA
AccessionPrimary (citable) accession number: B2V0F0
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: July 1, 2008
Last modified: January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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