Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

B2V049 (GLGA_CLOBA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:CLH_3166
OrganismClostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP]
Taxonomic identifier508767 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 478478Glycogen synthase HAMAP-Rule MF_00484
PRO_1000126061

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
B2V049 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: D9BA37E2E4E34AD7

FASTA47855,860
        10         20         30         40         50         60 
MRVLFVASEA HPFIKSGGLG DVAGALPKEL ARKGVDVRVV IPKYREINNE LKNKLRFNKW 

        70         80         90        100        110        120 
FNVDVGWRNQ YCGILEYEYD GVIYYFVDNE YYFSRGGMYG HYDDAERFAF FDRAVLDMIK 

       130        140        150        160        170        180 
QLDWKPNIIH CNDWQTGMIP VLLKLEYMRK DMFYWDIKSV FSIHNIAFQG VFDPVILPEL 

       190        200        210        220        230        240 
FGYDYEQYTN TNLKFDDGVG FMKGAINYSD MITTVSYSYA EEIKTPEFGE RLDWLLREKS 

       250        260        270        280        290        300 
YMLRGILNGI DYDEFNPKND NLINKNYDVN NINDKYENKR NLQSELGLNV NENIPIIAMV 

       310        320        330        340        350        360 
TRLTSQKGLD LLVNISERLL QNDIQLVIVG TGDKHYEDHF KWLDYKYGNK VSANIRFDNN 

       370        380        390        400        410        420 
LAHKVYAASD MFLMPSLFEP CGLGQLIALR YGSIPIVRET GGLKDTIRAY NEYTGEGNGF 

       430        440        450        460        470 
SFYNYNADEL LHIIEYALKI YYDKNKWSNL VKNAMNSNNS WSKSADEYLN MYKELSYR 

« Hide

References

[1]"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43."
Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Alaska E43 / Type E3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001078 Genomic DNA. Translation: ACD53157.1.
RefSeqYP_001922535.1. NC_010723.1.

3D structure databases

ProteinModelPortalB2V049.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING508767.CLH_3166.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD53157; ACD53157; CLH_3166.
GeneID6319896.
KEGGcbt:CLH_3166.
PATRIC19422575. VBICloBot115804_3070.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycCBOT508767:GHKO-3155-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CLOBA
AccessionPrimary (citable) accession number: B2V049
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: July 1, 2008
Last modified: February 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways