B2UYC9 (RL15_CLOBA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L15

Gene names

Name:	rplO
Ordered Locus Names:	CLH_0256

Organism

Clostridium botulinum (strain Alaska E43 / Type E3) [Complete proteome] [HAMAP]

Taxonomic identifier

508767 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium botulinum › Clostridium botulinum E

Protein attributes

Sequence length	146 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP-Rule MF_01341
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01341
Sequence similarities	Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 146	146	50S ribosomal protein L15 HAMAP-Rule MF_01341		PRO_1000142794

Sequences

	Sequence		Length	Mass (Da)
	B2UYC9 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: D61FCDE0BED58EAE	FASTA	146	15,657
	10 20 30 40 50 60 MKLHELQPAA GSRKAPKRVG RGTGSGLGRN AGKGEKGQNA RSGGGVRPGF EGGQMPLYRR 70 80 90 100 110 120 LPKRGFTNIF AKKYVSINVD RLNIFENGTE ITPEVLLERR VVSKVLDGVK ILGNGNLEKS 130 140 LIVKGCKFSK SAIEKIEAAG GKVEVI

References

[1]

"Complete genome sequence of Clostridium botulinum E3 str. Alaska E43." Brinkac L.M., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Alaska E43 / Type E3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001078 Genomic DNA. Translation: ACD51480.1.
RefSeq	YP_001919691.1. NC_010723.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	508767.CLH_0256.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACD51480; ACD51480; CLH_0256.
GeneID	6318418.
KEGG	cbt:CLH_0256.
PATRIC	19416784. VBICloBot115804_0223.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0200.
HOGENOM	HOG000231262.
KO	K02876.
OMA	RFEGGQM.
ProtClustDB	PRK05592.
Enzyme and pathway databases
BioCyc	CBOT508767:GHKO-254-MONOMER.
Family and domain databases
HAMAP	MF_01341_B. Ribosomal_L15_B.
InterPro	IPR005749. Ribosomal_L15_bac-type. IPR001196. Ribosomal_L15_CS. IPR021131. Ribosomal_L18e/L15P. [Graphical view]
PANTHER	PTHR12934. PTHR12934. 1 hit.
Pfam	PF00828. Ribosomal_L18e. 1 hit. [Graphical view]
SUPFAM	SSF52080. Ribosomal_L18e/L15. 1 hit.
TIGRFAMs	TIGR01071. rplO_bact. 1 hit.
PROSITE	PS00475. RIBOSOMAL_L15. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL15_CLOBA

Accession

Primary (citable) accession number: B2UYC9

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 14, 2009
Last sequence update:	July 1, 2008
Last modified:	May 29, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program