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B2UPZ9 (B2UPZ9_AKKM8) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Amuc_0697
OrganismAkkermansia muciniphila (strain ATCC BAA-835) [Complete proteome] [HAMAP] EMBL ACD04534.1
Taxonomic identifier349741 [NCBI]
Taxonomic lineageBacteriaVerrucomicrobiaVerrucomicrobiaeVerrucomicrobialesVerrucomicrobiaceaeAkkermansia

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2424 Potential EMBL ACD04534.1
Chain25 – 381357 Potential EMBL ACD04534.1
PRO_5000370550

Sequences

Sequence LengthMass (Da)Tools
B2UPZ9 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: E62F1AE02906C65E

FASTA38142,447
        10         20         30         40         50         60 
MINTMKSLLA LCLFYSAASV STAETPIKHT SFRPGEIWTD NNGAHINAHG GGILYDKGTY 

        70         80         90        100        110        120 
YWYGEHKVEG DAGNYAQVGV HCYSSKDLYN WKDEGIALKV VEGDHSHPIA RGCILERPKV 

       130        140        150        160        170        180 
VYNKKTGKYV MWFHLELKGK GYGSAYAGVA TAAKPTGPFK FLKAGRVNPG KWPLNMDKKD 

       190        200        210        220        230        240 
QTMETFKGVP GLTSSALPEG VRSEDMFKKD FEKGQMSRDM TIFVDDDGKA YHIYSSEENS 

       250        260        270        280        290        300 
TTHIAELTPD YTGHTGKFVR AFPGRFMEAP AIFKHKGKYY FIASGCTGWA PNAARSAVAK 

       310        320        330        340        350        360 
NIAGPWMELK NPCVGPKAGI TFGGQSTFIL PVQGKPGKFI FMADIWRPQN AIDGRYMWLP 

       370        380 
IQFDGDQIKL EWKDEWTLKD M 

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References

[1]"Complete sequence of Akkermansia muciniphila ATCC BAA-835."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N. expand/collapse author list , Smidt H., Derrien M., Plugge C.M., Zoetendal E.G., de Vos W.M., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC BAA-835 EMBL ACD04534.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001071 Genomic DNA. Translation: ACD04534.1.
RefSeqYP_001877315.1. NC_010655.1.

3D structure databases

ProteinModelPortalB2UPZ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGB2UPZ9.

Protein family/group databases

CAZyGH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6273907.
GenomeReviewsGene locus Amuc_0697 in contig CP001071_GR.
KEGGamu:Amuc_0697.
PATRIC20834074. VBIAkkMuc16855_0790.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG484439.
OMAETDETHD.
ProtClustDBCLSK834098.

Family and domain databases

InterProIPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 2 hits.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF04616. Glyco_hydro_43. 2 hits.
[Graphical view]
SUPFAMSSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2UPZ9_AKKM8
AccessionPrimary (citable) accession number: B2UPZ9
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)