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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Amuc_1564

Organism
Akkermansia muciniphila (strain ATCC BAA-835)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciAMUC349741:GHZ7-1612-MONOMER.

Protein family/group databases

REBASEi17917. AmuORF1564P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Amuc_1564Imported
OrganismiAkkermansia muciniphila (strain ATCC BAA-835)Imported
Taxonomic identifieri349741 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaVerrucomicrobiaeVerrucomicrobialesVerrucomicrobiaceaeAkkermansia
ProteomesiUP000001031: Chromosome

Family & Domainsi

Phylogenomic databases

eggNOGiNOG11693.
HOGENOMiHOG000067092.
KOiK01155.
OMAiHHIMCSI.
OrthoDBiEOG67Q982.

Family and domain databases

InterProiIPR010324. DRP.
[Graphical view]
PfamiPF06044. DRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2ULJ8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDLFFNNNVT EGYKNHSQIA RRLTEDWVER NMFCPICGHS VLNHYQNNKP
60 70 80 90 100
VADFYCCCCH SDFELKSLKS SNKILSKKIN DGAYDTMISR IKSYNNPNFF
110 120 130 140 150
FMNYADGAVN NLWLIPNHFF IPAIIEKRPP LSANAKRAGW TGCNILLSEI
160 170 180 190 200
PESGKIQIIK NSIVIEKEEI LAKYKRTKSL LTKNLDSRGW LMDVLACVER
210 220 230 240 250
LPNKDFTLNE MYLFTEELQA KHPVNTFIQP KIRQQLQRLR DKGYIEFLDR

GHYRKL
Length:256
Mass (Da):29,921
Last modified:July 1, 2008 - v1
Checksum:iE12CAE258D42953E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001071 Genomic DNA. Translation: ACD05385.1.
RefSeqiWP_012420600.1. NC_010655.1.
YP_001878166.1. NC_010655.1.

Genome annotation databases

EnsemblBacteriaiACD05385; ACD05385; Amuc_1564.
GeneIDi6273678.
KEGGiamu:Amuc_1564.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001071 Genomic DNA. Translation: ACD05385.1.
RefSeqiWP_012420600.1. NC_010655.1.
YP_001878166.1. NC_010655.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi17917. AmuORF1564P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD05385; ACD05385; Amuc_1564.
GeneIDi6273678.
KEGGiamu:Amuc_1564.

Phylogenomic databases

eggNOGiNOG11693.
HOGENOMiHOG000067092.
KOiK01155.
OMAiHHIMCSI.
OrthoDBiEOG67Q982.

Enzyme and pathway databases

BioCyciAMUC349741:GHZ7-1612-MONOMER.

Family and domain databases

InterProiIPR010324. DRP.
[Graphical view]
PfamiPF06044. DRP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes."
    van Passel M.W., Kant R., Zoetendal E.G., Plugge C.M., Derrien M., Malfatti S.A., Chain P.S., Woyke T., Palva A., de Vos W.M., Smidt H.
    PLoS ONE 6:E16876-E16876(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-835Imported.

Entry informationi

Entry nameiB2ULJ8_AKKM8
AccessioniPrimary (citable) accession number: B2ULJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: February 4, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.