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B2UKZ0 (B2UKZ0_AKKM8) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Pseudouridine synthase EMBL ACD05263.1
Gene names
Ordered Locus Names:Amuc_1441
OrganismAkkermansia muciniphila (strain ATCC BAA-835) [Complete proteome] [HAMAP] EMBL ACD05263.1
Taxonomic identifier349741 [NCBI]
Taxonomic lineageBacteria › Verrucomicrobia › Verrucomicrobiae › Verrucomicrobiales › Verrucomicrobiaceae › Akkermansia ›

Protein attributes

Sequence length258 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B2UKZ0 [UniParc].

Last modified July 1, 2008. Version 1.
Checksum: 563A23DA17EEB8A1

FASTA25829,234
        10         20         30         40         50         60 
MWIPISEAPI ACFPHFEVAA ESGDWIVVDK GAPLIVHPSN GKKEPCLLEG VEALLSYEIA 

        70         80         90        100        110        120 
NGAALSLVNR LDRETSGLTL VAKHKRAARE LGRAMQRRLI HKEYLAIVQE WPEWTETACT 

       130        140        150        160        170        180 
APILRQGEVA ESRIWVKQAV HPAGKACTTV FRKERTWNTR RGPLALVRCI PETGRMHQIR 

       190        200        210        220        230        240 
VHLAHLGHPI LGDKIYGPSE HCYLEYIQHG WSRELEERLV LPRHALHACR LEFPFDEETF 

       250 
TAEAPLPEDM RLLLETGD

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References

[1]"Complete sequence of Akkermansia muciniphila ATCC BAA-835."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N. expand/collapse author list , Smidt H., Derrien M., Plugge C.M., Zoetendal E.G., de Vos W.M., Richardson P.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-835 EMBL ACD05263.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001071 Genomic DNA. Translation: ACD05263.1.
RefSeqYP_001878044.1. NC_010655.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING349741.Amuc_1441.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD05263; ACD05263; Amuc_1441.
GeneID6274459.
KEGGamu:Amuc_1441.
PATRIC20835808. VBIAkkMuc16855_1637.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0564.
HOGENOMHOG000275919.
KOK06180.
OMADFAHARV.
ProtClustDBCLSK444812.

Enzyme and pathway databases

BioCycAMUC349741:GHZ7-1487-MONOMER.

Family and domain databases

InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMSSF55120. PsdUridine_synth_cat_dom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB2UKZ0_AKKM8
AccessionPrimary (citable) accession number: B2UKZ0
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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