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B2UKZ0

- B2UKZ0_AKKM8

UniProt

B2UKZ0 - B2UKZ0_AKKM8

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Protein
Submitted name:

Pseudouridine synthase

Gene

Amuc_1441

Organism
Akkermansia muciniphila (strain ATCC BAA-835)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. pseudouridine synthase activity Source: InterPro
  2. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAMUC349741:GHZ7-1487-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pseudouridine synthaseImported
Gene namesi
Ordered Locus Names:Amuc_1441Imported
OrganismiAkkermansia muciniphila (strain ATCC BAA-835)Imported
Taxonomic identifieri349741 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaVerrucomicrobiaeVerrucomicrobialesVerrucomicrobiaceaeAkkermansia
ProteomesiUP000001031: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349741.Amuc_1441.

Structurei

3D structure databases

ProteinModelPortaliB2UKZ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0564.
HOGENOMiHOG000275919.
KOiK06180.
OMAiAYSIRFN.
OrthoDBiEOG6P070X.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.

Sequencei

Sequence statusi: Complete.

B2UKZ0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MWIPISEAPI ACFPHFEVAA ESGDWIVVDK GAPLIVHPSN GKKEPCLLEG
60 70 80 90 100
VEALLSYEIA NGAALSLVNR LDRETSGLTL VAKHKRAARE LGRAMQRRLI
110 120 130 140 150
HKEYLAIVQE WPEWTETACT APILRQGEVA ESRIWVKQAV HPAGKACTTV
160 170 180 190 200
FRKERTWNTR RGPLALVRCI PETGRMHQIR VHLAHLGHPI LGDKIYGPSE
210 220 230 240 250
HCYLEYIQHG WSRELEERLV LPRHALHACR LEFPFDEETF TAEAPLPEDM

RLLLETGD
Length:258
Mass (Da):29,234
Last modified:July 1, 2008 - v1
Checksum:i563A23DA17EEB8A1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001071 Genomic DNA. Translation: ACD05263.1.
RefSeqiWP_012420478.1. NC_010655.1.
YP_001878044.1. NC_010655.1.

Genome annotation databases

EnsemblBacteriaiACD05263; ACD05263; Amuc_1441.
GeneIDi6274459.
KEGGiamu:Amuc_1441.
PATRICi20835808. VBIAkkMuc16855_1637.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001071 Genomic DNA. Translation: ACD05263.1 .
RefSeqi WP_012420478.1. NC_010655.1.
YP_001878044.1. NC_010655.1.

3D structure databases

ProteinModelPortali B2UKZ0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 349741.Amuc_1441.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD05263 ; ACD05263 ; Amuc_1441 .
GeneIDi 6274459.
KEGGi amu:Amuc_1441.
PATRICi 20835808. VBIAkkMuc16855_1637.

Phylogenomic databases

eggNOGi COG0564.
HOGENOMi HOG000275919.
KOi K06180.
OMAi AYSIRFN.
OrthoDBi EOG6P070X.

Enzyme and pathway databases

BioCyci AMUC349741:GHZ7-1487-MONOMER.

Family and domain databases

InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome of Akkermansia muciniphila, a dedicated intestinal mucin degrader, and its use in exploring intestinal metagenomes."
    van Passel M.W., Kant R., Zoetendal E.G., Plugge C.M., Derrien M., Malfatti S.A., Chain P.S., Woyke T., Palva A., de Vos W.M., Smidt H.
    PLoS ONE 6:E16876-E16876(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-835Imported.

Entry informationi

Entry nameiB2UKZ0_AKKM8
AccessioniPrimary (citable) accession number: B2UKZ0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 29, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3