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Protein
Submitted name:

AMP-dependent synthetase and ligase

Gene

Rpic_4143

Organism
Ralstonia pickettii (strain 12J)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciRPIC402626:GH94-4201-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AMP-dependent synthetase and ligaseImported
Gene namesi
Ordered Locus Names:Rpic_4143Imported
OrganismiRalstonia pickettii (strain 12J)Imported
Taxonomic identifieri402626 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia
ProteomesiUP000002566 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi402626.Rpic_4143.

Structurei

3D structure databases

ProteinModelPortaliB2UI43.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229982.
KOiK01895.
OMAiPWIAGAT.
OrthoDBiEOG60GRR8.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B2UI43-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSLDAFLRC RDFLLAHRED YDTAVRDFAW PQLDRFNWAL DYFDAMARGN
60 70 80 90 100
DAVALWVVDD QGNETRLSFA QMAERSARVA NHLRALGVQR GDRILLMLGN
110 120 130 140 150
VPGLWDVMLA SIKIGAVIIP ATTLLTAEDL RERIAMGEVS HVVVGGADCA
160 170 180 190 200
KLDAVSGTFT RIAVGTDKAP AGWHRFEDAY DASAEFTPDA PTQASDPLLL
210 220 230 240 250
YFTSGTTSKP KLVMHTHASY PVGHLSTLYW IGLRPGDVHW NISSPGWAKH
260 270 280 290 300
AWSCFFAPWN AGATVFIYNY ARFEPKAVLD VLCRAKVTTL CAPPTVWRML
310 320 330 340 350
IQEDLAAWKP ALRELVGAGE PLNPEVIERV RAAWGITIRD GYGQTETTCQ
360 370 380 390 400
IGNSPGQRVQ PGSMGRPLPG YRITLRDPDG HEAEEGEICI ELNSRPTGLM
410 420 430 440 450
EGYAGNADKT AEAMRGGVYH TSDIAARDAS GYLTYVGRAD DVFKASDYRV
460 470 480 490 500
SPFELESVLI EHPAIAEAAV VPSPDPLRLA VPKAFLVLRA GHEAGPELAR
510 520 530 540 550
DILGFCRSRL ASYKRVRRIE FADLPKTISG KIRRVELRMR EAARSENTAG
560
VRNLQEYWEE DFPGD
Length:565
Mass (Da):62,417
Last modified:July 1, 2008 - v1
Checksum:i4ACEF5F85F548132
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001069 Genomic DNA. Translation: ACD29244.1.
RefSeqiWP_012430221.1. NC_010678.1.
YP_001892671.1. NC_010678.1.

Genome annotation databases

EnsemblBacteriaiACD29244; ACD29244; Rpic_4143.
GeneIDi6285556.
KEGGirpi:Rpic_4143.
PATRICi20249229. VBIRalPic63053_0390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001069 Genomic DNA. Translation: ACD29244.1.
RefSeqiWP_012430221.1. NC_010678.1.
YP_001892671.1. NC_010678.1.

3D structure databases

ProteinModelPortaliB2UI43.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi402626.Rpic_4143.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD29244; ACD29244; Rpic_4143.
GeneIDi6285556.
KEGGirpi:Rpic_4143.
PATRICi20249229. VBIRalPic63053_0390.

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229982.
KOiK01895.
OMAiPWIAGAT.
OrthoDBiEOG60GRR8.

Enzyme and pathway databases

BioCyciRPIC402626:GH94-4201-MONOMER.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Ralstonia pickettii 12J."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.
    , Kyrpides N., Mikhailova N., Marsh T., Richardson P.
    Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12JImported.

Entry informationi

Entry nameiB2UI43_RALPJ
AccessioniPrimary (citable) accession number: B2UI43
Entry historyi
Integrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: May 27, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.