B2UH07 (B2UH07_RALPJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alginate lyase EMBL ACD28690.1

Gene names

Ordered Locus Names:

Rpic_3571

Organism

Ralstonia pickettii (strain 12J) [Complete proteome] [HAMAP]

Taxonomic identifier

402626 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Ralstonia

Protein attributes

Sequence length	320 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACD28690.1
Molecular function	Lyase EMBL ACD28690.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alginic acid catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	poly(beta-D-mannuronate) lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL ACD28690.1
	Chain	30 – 320	291	Potential EMBL ACD28690.1		PRO_5000369942

Sequences

	Sequence		Length	Mass (Da)
	B2UH07 [UniParc]. Last modified July 1, 2008. Version 1. Checksum: 02397044B0DDCF43	FASTA	320	35,618
	10 20 30 40 50 60 MRRAYLRTLF ALSLAVGAGF GLVHAARACE IPAPVQTIDP PGFYDDAAGY ARDVKPMRNF 70 80 90 100 110 120 IAQLNASADK GDWTCVLSQL RTWADADALM GKISGYQGHY ERSWAGTDFA MVLLRMPSDI 130 140 150 160 170 180 RKRNQAQLDA IAPWLERIAI ATRNAEAINH LHNNLVYWAG LNLIAIGTAT DNSDLINSGL 190 200 210 220 230 240 LRIREGIRDI GPDGALAREV KRGDRALHYH TFALIPLVFA AELVQRRHID LYRENGHAIG 250 260 270 280 290 300 RLANLVINAV VDPASFEKIT PIKQALFPWT LQDELCWMEP YYAHVRDPRL PALIAPRRPF 310 320 SEWRLGGNVT AAWGAELPGH

References

[1]

"Complete sequence of chromosome 1 of Ralstonia pickettii 12J." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Mikhailova N., Marsh T., Richardson P. Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001068 Genomic DNA. Translation: ACD28690.1.
RefSeq	YP_001901122.1. NC_010682.1.
3D structure databases
ProteinModelPortal	B2UH07.
ModBase	Search...
Protein-protein interaction databases
STRING	B2UH07.
Protein family/group databases
CAZy	PL5. Polysaccharide Lyase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6286710.
GenomeReviews	Gene locus Rpic_3571 in contig CP001068_GR.
KEGG	rpi:Rpic_3571.
PATRIC	20257989. VBIRalPic63053_4709.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG701480.
OMA	AAWSVMA.
ProtClustDB	PRK00325.
Family and domain databases
InterPro	IPR008397. Alginate_lyase_dom. IPR008929. Chondroitin_lyas. [Graphical view]
Gene3D	G3DSA:1.50.10.110. Alginate_lyase. 1 hit.
KO	K01729.
Pfam	PF05426. Alginate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B2UH07_RALPJ

Accession

Primary (citable) accession number: B2UH07

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 2008
Last sequence update:	July 1, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)